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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=96)
EGVLYKWTNYLTGWQPRWFVLDNGILSYYDSQDKGSKGSIKAVCEIKVHSADNTRELIIP
GEQHFYKAVNAAERQRWLVALGSSKASLTDTRLVPR

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3rcp-a2-m2-cA 96 96 1.0000 1.0000 1.0000 4.45e-69 3rcp-a2-m1-cA_3rcp-a2-m2-cA
2 3rcp-a2-m1-cA 96 96 1.0000 1.0000 1.0000 4.45e-69 3rcp-a2-m1-cA_3rcp-a2-m2-cA
3 4hhv-a1-m1-cB 101 92 0.4271 0.4059 0.4457 2.23e-14 4hhv-a1-m1-cB_4hhv-a1-m1-cA
4 4hhv-a1-m1-cA 103 92 0.4271 0.3981 0.4457 2.84e-14 4hhv-a1-m1-cB_4hhv-a1-m1-cA
5 1fb8-a2-m4-cA 106 87 0.2292 0.2075 0.2529 0.033 1fb8-a2-m2-cA_1fb8-a2-m4-cA
6 1fb8-a2-m2-cA 106 87 0.2292 0.2075 0.2529 0.033 1fb8-a2-m2-cA_1fb8-a2-m4-cA
7 1fhw-a3-m1-cB 126 68 0.2083 0.1587 0.2941 0.082 1fhw-a3-m1-cA_1fhw-a3-m1-cB
8 6u3g-a1-m1-cB 397 41 0.1562 0.0378 0.3659 0.094 6u3g-a1-m1-cA_6u3g-a1-m1-cB
9 6u3g-a1-m1-cA 397 41 0.1562 0.0378 0.3659 0.094 6u3g-a1-m1-cA_6u3g-a1-m1-cB
10 6u3e-a1-m1-cB 397 41 0.1562 0.0378 0.3659 0.094 6u3e-a1-m1-cA_6u3e-a1-m1-cB
11 6u3e-a1-m1-cA 397 41 0.1562 0.0378 0.3659 0.094 6u3e-a1-m1-cA_6u3e-a1-m1-cB
12 1fhw-a3-m1-cA 122 68 0.2083 0.1639 0.2941 0.095 1fhw-a3-m1-cA_1fhw-a3-m1-cB
13 2xbg-a1-m2-cA 308 63 0.1667 0.0519 0.2540 2.7 2xbg-a1-m1-cA_2xbg-a1-m2-cA
14 2xbg-a1-m1-cA 308 63 0.1667 0.0519 0.2540 2.7 2xbg-a1-m1-cA_2xbg-a1-m2-cA
15 3fn9-a3-m2-cC 673 56 0.1458 0.0208 0.2500 2.8 3fn9-a3-m2-cD_3fn9-a3-m2-cC
16 3fn9-a3-m2-cD 666 56 0.1458 0.0210 0.2500 2.9 3fn9-a3-m2-cD_3fn9-a3-m1-cA, 3fn9-a3-m2-cD_3fn9-a3-m2-cA, 3fn9-a3-m2-cD_3fn9-a3-m2-cC
17 3fn9-a3-m2-cA 672 56 0.1458 0.0208 0.2500 2.9 3fn9-a3-m2-cD_3fn9-a3-m2-cA
18 3fn9-a3-m1-cA 672 56 0.1458 0.0208 0.2500 2.9 3fn9-a3-m2-cD_3fn9-a3-m1-cA
19 1u5d-a8-m1-cC 107 28 0.1146 0.1028 0.3929 4.8 1u5d-a8-m1-cC_1u5d-a8-m7-cD
20 1u5d-a8-m7-cD 108 28 0.1146 0.1019 0.3929 5.0 1u5d-a8-m1-cC_1u5d-a8-m7-cD
21 1u5d-a6-m6-cD 108 28 0.1146 0.1019 0.3929 5.0 1u5d-a6-m1-cA_1u5d-a6-m6-cD
22 1u5d-a6-m1-cA 108 28 0.1146 0.1019 0.3929 5.0 1u5d-a6-m1-cA_1u5d-a6-m6-cD
23 2z6b-a1-m3-cD 368 64 0.1771 0.0462 0.2656 5.9 2z6b-a1-m2-cD_2z6b-a1-m3-cD
24 2z6b-a1-m2-cD 368 64 0.1771 0.0462 0.2656 5.9 2z6b-a1-m2-cD_2z6b-a1-m3-cD
25 3f5q-a2-m1-cA 228 24 0.1146 0.0482 0.4583 7.2 3f5q-a2-m1-cA_3f5q-a2-m1-cB
26 3f5q-a2-m1-cB 229 24 0.1146 0.0480 0.4583 7.4 3f5q-a2-m1-cA_3f5q-a2-m1-cB
27 6nj1-a1-m2-cA 259 51 0.1667 0.0618 0.3137 7.6 6nj1-a1-m1-cA_6nj1-a1-m2-cA
28 6nj1-a1-m1-cA 259 51 0.1667 0.0618 0.3137 7.6 6nj1-a1-m1-cA_6nj1-a1-m2-cA
29 2otx-a1-m1-cB 168 28 0.1250 0.0714 0.4286 7.7 2otx-a1-m1-cB_2otx-a1-m1-cA
30 1u5e-a1-m1-cB 168 28 0.1250 0.0714 0.4286 7.7 1u5e-a1-m1-cB_1u5e-a1-m1-cA
31 1u5f-a2-m2-cA 119 28 0.1250 0.1008 0.4286 8.1 1u5f-a2-m2-cA_1u5f-a2-m1-cA
32 1u5f-a2-m1-cA 119 28 0.1250 0.1008 0.4286 8.1 1u5f-a2-m2-cA_1u5f-a2-m1-cA
33 2otx-a1-m1-cA 170 28 0.1250 0.0706 0.4286 8.2 2otx-a1-m1-cB_2otx-a1-m1-cA
34 1u5e-a1-m1-cA 170 28 0.1250 0.0706 0.4286 8.2 1u5e-a1-m1-cB_1u5e-a1-m1-cA
35 3f5s-a1-m1-cA 226 14 0.0938 0.0398 0.6429 9.8 3f5s-a1-m1-cA_3f5s-a1-m1-cB
36 3f5s-a1-m1-cB 227 14 0.0938 0.0396 0.6429 10.0 3f5s-a1-m1-cA_3f5s-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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