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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=87)
EHVVYVGNKPVMNYVLATLTQLNEGADEVVIKARGRAISRAVDVAEIVRNRFMPGVKVKE
IKIDTEELESEQGRRSNVSTIEIVLAK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1nfj-a1-m4-cA 87 87 1.0000 1.0000 1.0000 4.12e-58 1nfj-a1-m1-cA_1nfj-a1-m4-cA
2 1nfj-a1-m3-cA 87 87 1.0000 1.0000 1.0000 4.12e-58 1nfj-a1-m1-cA_1nfj-a1-m3-cA
3 1nfj-a1-m1-cA 87 87 1.0000 1.0000 1.0000 4.12e-58 1nfj-a1-m1-cA_1nfj-a1-m3-cA, 1nfj-a1-m1-cA_1nfj-a1-m4-cA
4 1nfh-a1-m2-cB 86 86 0.9885 1.0000 1.0000 2.01e-57 1nfh-a1-m1-cA_1nfh-a1-m2-cB
5 1nfh-a1-m1-cA 86 86 0.9885 1.0000 1.0000 2.01e-57 1nfh-a1-m1-cA_1nfh-a1-m2-cB
6 2z7c-a2-m1-cD 92 88 0.7586 0.7174 0.7500 7.02e-40 2z7c-a2-m1-cC_2z7c-a2-m1-cD
7 2z7c-a2-m1-cC 89 87 0.7471 0.7303 0.7471 3.33e-39 2z7c-a2-m1-cC_2z7c-a2-m1-cD
8 3toe-a1-m1-cB 86 86 0.6322 0.6395 0.6395 4.26e-34 3toe-a1-m1-cA_3toe-a1-m1-cB
9 3toe-a1-m1-cA 86 86 0.6322 0.6395 0.6395 4.26e-34 3toe-a1-m1-cA_3toe-a1-m1-cB
10 2bky-a1-m1-cB 89 87 0.6092 0.5955 0.6092 1.59e-32 2bky-a1-m1-cA_2bky-a1-m1-cB
11 2bky-a1-m1-cA 89 87 0.6092 0.5955 0.6092 1.59e-32 2bky-a1-m1-cA_2bky-a1-m1-cB
12 1h0x-a1-m1-cB 89 87 0.6092 0.5955 0.6092 1.59e-32 1h0x-a1-m1-cA_1h0x-a1-m1-cB
13 1h0x-a1-m1-cA 89 87 0.6092 0.5955 0.6092 1.59e-32 1h0x-a1-m1-cA_1h0x-a1-m1-cB
14 4z9e-a2-m1-cD 85 86 0.5517 0.5647 0.5581 9.85e-32 4z9e-a2-m1-cC_4z9e-a2-m1-cD
15 4z9e-a2-m1-cC 85 86 0.5517 0.5647 0.5581 9.85e-32 4z9e-a2-m1-cC_4z9e-a2-m1-cD
16 3wbm-a1-m1-cC 86 88 0.5747 0.5814 0.5682 5.51e-27 3wbm-a1-m1-cA_3wbm-a1-m1-cC
17 3wbm-a1-m1-cA 86 88 0.5747 0.5814 0.5682 5.51e-27 3wbm-a1-m1-cA_3wbm-a1-m1-cC
18 3u6y-a1-m1-cC 99 89 0.5747 0.5051 0.5618 4.20e-25 3u6y-a1-m1-cA_3u6y-a1-m1-cC
19 3u6y-a1-m1-cA 99 89 0.5747 0.5051 0.5618 4.20e-25 3u6y-a1-m1-cA_3u6y-a1-m1-cC
20 2bky-a1-m1-cY 86 58 0.2529 0.2558 0.3793 1.02e-07 2bky-a1-m1-cX_2bky-a1-m1-cY
21 2bky-a1-m1-cX 86 58 0.2529 0.2558 0.3793 1.02e-07 2bky-a1-m1-cX_2bky-a1-m1-cY
22 1udv-a1-m1-cB 86 58 0.2529 0.2558 0.3793 1.02e-07 1udv-a1-m1-cB_1udv-a1-m1-cA
23 1udv-a1-m1-cA 88 58 0.2529 0.2500 0.3793 1.03e-07 1udv-a1-m1-cB_1udv-a1-m1-cA
24 2o1x-a2-m1-cD 530 63 0.2529 0.0415 0.3492 0.51 2o1x-a2-m1-cD_2o1x-a2-m1-cC
25 2o1x-a2-m1-cC 538 63 0.2529 0.0409 0.3492 0.54 2o1x-a2-m1-cD_2o1x-a2-m1-cC
26 3h3a-a1-m1-cA 417 43 0.1839 0.0384 0.3721 2.1 3h3a-a1-m1-cA_3h3a-a1-m1-cB
27 6x6f-a3-m1-cH 84 45 0.1954 0.2024 0.3778 2.8 6x6f-a3-m1-cF_6x6f-a3-m1-cH
28 6x6f-a3-m1-cF 84 45 0.1954 0.2024 0.3778 2.8 6x6f-a3-m1-cF_6x6f-a3-m1-cH
29 3jzv-a2-m6-cA 144 45 0.1379 0.0833 0.2667 3.9 3jzv-a2-m1-cA_3jzv-a2-m6-cA, 3jzv-a2-m3-cA_3jzv-a2-m6-cA, 3jzv-a2-m5-cA_3jzv-a2-m6-cA
30 3jzv-a2-m5-cA 144 45 0.1379 0.0833 0.2667 3.9 3jzv-a2-m5-cA_3jzv-a2-m6-cA
31 3jzv-a2-m3-cA 144 45 0.1379 0.0833 0.2667 3.9 3jzv-a2-m3-cA_3jzv-a2-m6-cA
32 3jzv-a2-m1-cA 144 45 0.1379 0.0833 0.2667 3.9 3jzv-a2-m1-cA_3jzv-a2-m6-cA
33 3dtn-a1-m1-cA 220 38 0.1609 0.0636 0.3684 4.8 3dtn-a1-m1-cB_3dtn-a1-m1-cA
34 3dtn-a1-m1-cB 213 38 0.1609 0.0657 0.3684 5.2 3dtn-a1-m1-cB_3dtn-a1-m1-cA
35 3h3a-a1-m1-cB 418 40 0.1724 0.0359 0.3750 7.3 3h3a-a1-m1-cA_3h3a-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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