Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=27)
EIAAIKQEIAAIKKEIAAIKEIAAIKQ

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4dzn-a1-m1-cB 31 27 0.8519 0.7419 0.8519 4.54e-08 4dzn-a1-m1-cA_4dzn-a1-m1-cB
2 4dzn-a1-m1-cA 31 27 0.8519 0.7419 0.8519 4.54e-08 4dzn-a1-m1-cA_4dzn-a1-m1-cB
3 3r4h-a2-m2-cF 28 27 0.8519 0.8214 0.8519 6.94e-08 3r4h-a2-m1-cE_3r4h-a2-m2-cF, 3r4h-a2-m2-cE_3r4h-a2-m2-cF
4 3r4h-a2-m2-cE 26 26 0.8148 0.8462 0.8462 3.34e-07 3r4h-a2-m2-cE_3r4h-a2-m2-cF
5 3r4h-a2-m2-cE 26 21 0.5556 0.5769 0.7143 0.52 3r4h-a2-m2-cE_3r4h-a2-m2-cF
6 3r4h-a2-m1-cE 26 26 0.8148 0.8462 0.8462 3.34e-07 3r4h-a2-m1-cE_3r4h-a2-m2-cF
7 3r4h-a2-m1-cE 26 21 0.5556 0.5769 0.7143 0.52 3r4h-a2-m1-cE_3r4h-a2-m2-cF
8 4dzm-a2-m3-cB 30 27 0.8148 0.7333 0.8148 3.57e-07 4dzm-a2-m1-cB_4dzm-a2-m3-cB
9 4dzm-a2-m1-cB 30 27 0.8148 0.7333 0.8148 3.57e-07 4dzm-a2-m1-cB_4dzm-a2-m3-cB
10 4dzk-a1-m3-cA 29 28 0.9630 0.8966 0.9286 7.55e-06 4dzk-a1-m2-cA_4dzk-a1-m3-cA
11 4dzk-a1-m2-cA 29 28 0.9630 0.8966 0.9286 7.55e-06 4dzk-a1-m2-cA_4dzk-a1-m3-cA
12 6i1j-a2-m6-cA 30 28 0.9259 0.8333 0.8929 3.88e-05 6i1j-a2-m1-cA_6i1j-a2-m6-cA, 6i1j-a2-m2-cA_6i1j-a2-m6-cA
13 6i1j-a2-m2-cA 30 28 0.9259 0.8333 0.8929 3.88e-05 6i1j-a2-m2-cA_6i1j-a2-m6-cA
14 6i1j-a2-m1-cA 30 28 0.9259 0.8333 0.8929 3.88e-05 6i1j-a2-m1-cA_6i1j-a2-m6-cA
15 7qdk-a1-m1-cC 29 27 0.6296 0.5862 0.6296 3.97e-04 7qdk-a1-m1-cB_7qdk-a1-m1-cC
16 7qdk-a1-m1-cB 29 27 0.6296 0.5862 0.6296 3.97e-04 7qdk-a1-m1-cB_7qdk-a1-m1-cC
17 7l33-a3-m7-cC 30 26 0.8519 0.7667 0.8846 5.77e-04 7l33-a3-m4-cC_7l33-a3-m7-cC
18 7l33-a3-m7-cC 30 20 0.6667 0.6000 0.9000 0.004 7l33-a3-m4-cC_7l33-a3-m7-cC
19 7l33-a3-m7-cC 30 15 0.5185 0.4667 0.9333 0.48 7l33-a3-m4-cC_7l33-a3-m7-cC
20 7l33-a3-m4-cC 30 26 0.8519 0.7667 0.8846 5.77e-04 7l33-a3-m4-cC_7l33-a3-m7-cC
21 7l33-a3-m4-cC 30 20 0.6667 0.6000 0.9000 0.004 7l33-a3-m4-cC_7l33-a3-m7-cC
22 7l33-a3-m4-cC 30 15 0.5185 0.4667 0.9333 0.48 7l33-a3-m4-cC_7l33-a3-m7-cC
23 5u5c-a2-m2-cF 27 20 0.5926 0.5926 0.8000 0.003 5u5c-a2-m2-cE_5u5c-a2-m2-cF
24 5u5c-a2-m2-cF 27 28 0.7778 0.7778 0.7500 0.006 5u5c-a2-m2-cE_5u5c-a2-m2-cF
25 5u5c-a2-m2-cE 27 20 0.5926 0.5926 0.8000 0.003 5u5c-a2-m2-cE_5u5c-a2-m2-cF
26 5u5c-a2-m2-cE 27 28 0.7778 0.7778 0.7500 0.006 5u5c-a2-m2-cE_5u5c-a2-m2-cF
27 5u59-a1-m2-cA 26 20 0.5556 0.5769 0.7500 0.019 5u59-a1-m1-cA_5u59-a1-m2-cA
28 5u59-a1-m2-cA 26 27 0.7037 0.7308 0.7037 0.52 5u59-a1-m1-cA_5u59-a1-m2-cA
29 5u59-a1-m1-cA 26 20 0.5556 0.5769 0.7500 0.019 5u59-a1-m1-cA_5u59-a1-m2-cA
30 5u59-a1-m1-cA 26 27 0.7037 0.7308 0.7037 0.52 5u59-a1-m1-cA_5u59-a1-m2-cA
31 7q1q-a1-m1-cB 30 20 0.4444 0.4000 0.6000 0.32 7q1q-a1-m1-cA_7q1q-a1-m1-cB
32 7q1q-a1-m1-cB 30 20 0.3704 0.3333 0.5000 2.1 7q1q-a1-m1-cA_7q1q-a1-m1-cB
33 7q1q-a1-m1-cA 30 20 0.4444 0.4000 0.6000 0.32 7q1q-a1-m1-cA_7q1q-a1-m1-cB
34 7q1q-a1-m1-cA 30 20 0.3704 0.3333 0.5000 2.1 7q1q-a1-m1-cA_7q1q-a1-m1-cB
35 5u5b-a1-m1-cB 26 24 0.6296 0.6538 0.7083 0.35 5u5b-a1-m1-cA_5u5b-a1-m1-cB
36 5u5b-a1-m1-cB 26 17 0.5185 0.5385 0.8235 1.3 5u5b-a1-m1-cA_5u5b-a1-m1-cB
37 5u5b-a1-m1-cA 26 24 0.6296 0.6538 0.7083 0.35 5u5b-a1-m1-cA_5u5b-a1-m1-cB
38 5u5b-a1-m1-cA 26 17 0.5185 0.5385 0.8235 1.3 5u5b-a1-m1-cA_5u5b-a1-m1-cB
39 7q1r-a1-m1-cB 30 20 0.4074 0.3667 0.5500 0.77 7q1r-a1-m1-cA_7q1r-a1-m1-cB
40 7q1r-a1-m1-cB 30 17 0.2963 0.2667 0.4706 7.9 7q1r-a1-m1-cA_7q1r-a1-m1-cB
41 7q1r-a1-m1-cA 30 20 0.4074 0.3667 0.5500 0.77 7q1r-a1-m1-cA_7q1r-a1-m1-cB
42 7q1r-a1-m1-cA 30 17 0.2963 0.2667 0.4706 7.9 7q1r-a1-m1-cA_7q1r-a1-m1-cB
43 1g6u-a2-m3-cB 48 24 0.4074 0.2292 0.4583 1.7 1g6u-a2-m1-cA_1g6u-a2-m3-cB, 1g6u-a2-m3-cA_1g6u-a2-m3-cB
44 1g6u-a2-m3-cB 48 20 0.3333 0.1875 0.4500 5.8 1g6u-a2-m1-cA_1g6u-a2-m3-cB, 1g6u-a2-m3-cA_1g6u-a2-m3-cB
45 1g6u-a2-m3-cA 48 24 0.4074 0.2292 0.4583 1.7 1g6u-a2-m3-cA_1g6u-a2-m3-cB
46 1g6u-a2-m3-cA 48 20 0.3333 0.1875 0.4500 5.8 1g6u-a2-m3-cA_1g6u-a2-m3-cB
47 1g6u-a2-m1-cA 48 24 0.4074 0.2292 0.4583 1.7 1g6u-a2-m1-cA_1g6u-a2-m3-cB
48 1g6u-a2-m1-cA 48 20 0.3333 0.1875 0.4500 5.8 1g6u-a2-m1-cA_1g6u-a2-m3-cB
49 7bas-a1-m1-cE 29 23 0.5185 0.4828 0.6087 2.3 7bas-a1-m1-cA_7bas-a1-m1-cE
50 7bas-a1-m1-cA 29 23 0.5185 0.4828 0.6087 2.3 7bas-a1-m1-cA_7bas-a1-m1-cE
51 4kht-a2-m3-cA 66 28 0.6296 0.2576 0.6071 4.7 4kht-a2-m2-cA_4kht-a2-m3-cA
52 4kht-a2-m2-cA 66 28 0.6296 0.2576 0.6071 4.7 4kht-a2-m2-cA_4kht-a2-m3-cA
53 7bau-a2-m1-cI 29 23 0.5556 0.5172 0.6522 6.1 7bau-a2-m1-cH_7bau-a2-m1-cI
54 7bau-a2-m1-cH 28 23 0.5556 0.5357 0.6522 6.6 7bau-a2-m1-cH_7bau-a2-m1-cI
55 4u5t-a1-m1-cB 37 24 0.2963 0.2162 0.3333 9.6 4u5t-a1-m1-cA_4u5t-a1-m1-cB
56 4u5t-a1-m1-cA 37 24 0.2963 0.2162 0.3333 9.6 4u5t-a1-m1-cA_4u5t-a1-m1-cB
57 4l8o-a1-m3-cA 164 24 0.3333 0.0549 0.3750 9.9 4l8o-a1-m2-cA_4l8o-a1-m3-cA
58 4l8o-a1-m2-cA 164 24 0.3333 0.0549 0.3750 9.9 4l8o-a1-m2-cA_4l8o-a1-m3-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600