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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=80)
EIESLARYAVDEHNKKQNSLLQFEKVVNTKQQVVSGTIYIITLEAVDGGKKKVYEAKVWE
KPWMNFKELQEFKLIGDAPS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6vlp-a1-m2-cA 80 80 1.0000 1.0000 1.0000 1.47e-54 6vlp-a1-m1-cA_6vlp-a1-m2-cA
2 6vlp-a1-m1-cA 80 80 1.0000 1.0000 1.0000 1.47e-54 6vlp-a1-m1-cA_6vlp-a1-m2-cA
3 4tx4-a1-m1-cA 83 80 0.7750 0.7470 0.7750 1.34e-43 4tx4-a1-m1-cB_4tx4-a1-m1-cA
4 4tx4-a1-m1-cB 79 77 0.7500 0.7595 0.7792 2.08e-41 4tx4-a1-m1-cB_4tx4-a1-m1-cA
5 5a0o-a1-m1-cS 93 88 0.6500 0.5591 0.5909 1.44e-26 5a0o-a1-m1-cB_5a0o-a1-m1-cS
6 5a0o-a1-m1-cB 93 88 0.6500 0.5591 0.5909 1.44e-26 5a0o-a1-m1-cB_5a0o-a1-m1-cS
7 5ohl-a4-m1-cE 89 84 0.6375 0.5730 0.6071 6.72e-26 5ohl-a4-m1-cB_5ohl-a4-m1-cE
8 5ohl-a4-m1-cB 89 84 0.6375 0.5730 0.6071 6.72e-26 5ohl-a4-m1-cB_5ohl-a4-m1-cE
9 5ohv-a1-m1-cD 90 84 0.6375 0.5667 0.6071 1.57e-25 5ohv-a1-m1-cB_5ohv-a1-m1-cD
10 5ohv-a1-m1-cB 89 84 0.6375 0.5730 0.6071 1.80e-25 5ohv-a1-m1-cB_5ohv-a1-m1-cD
11 3ul5-a1-m1-cA 82 73 0.5000 0.4878 0.5479 2.30e-24 3ul5-a1-m1-cB_3ul5-a1-m1-cA
12 3ul5-a1-m1-cB 81 73 0.5000 0.4938 0.5479 2.55e-24 3ul5-a1-m1-cB_3ul5-a1-m1-cA
13 7c03-a2-m2-cA 312 86 0.5500 0.1410 0.5116 3.42e-14 7c03-a2-m1-cA_7c03-a2-m2-cA
14 7c03-a2-m1-cA 312 86 0.5500 0.1410 0.5116 3.42e-14 7c03-a2-m1-cA_7c03-a2-m2-cA
15 5kux-a2-m2-cA 92 76 0.3750 0.3261 0.3947 5.72e-10 5kux-a2-m1-cA_5kux-a2-m2-cA
16 5kux-a2-m1-cA 92 76 0.3750 0.3261 0.3947 5.72e-10 5kux-a2-m1-cA_5kux-a2-m2-cA
17 4zm8-a2-m1-cC 109 46 0.2125 0.1560 0.3696 2.1 4zm8-a2-m1-cC_4zm8-a2-m1-cD
18 4zm8-a2-m1-cD 109 50 0.2125 0.1560 0.3400 2.2 4zm8-a2-m1-cC_4zm8-a2-m1-cD
19 3q2k-a2-m1-cK 322 61 0.1875 0.0466 0.2459 6.1 3q2k-a2-m1-cL_3q2k-a2-m1-cK
20 3q2k-a1-m1-cE 321 61 0.1875 0.0467 0.2459 6.2 3q2k-a1-m1-cE_3q2k-a1-m1-cH
21 3q2k-a1-m1-cH 342 61 0.1875 0.0439 0.2459 6.3 3q2k-a1-m1-cE_3q2k-a1-m1-cH

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Reference:
Jacob Schwartz et al.

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