Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=27)
EIFTLQVRGRERYEILKKLNDSLELSD

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Dimers
1 4d1l-a2-m2-cB 37 27 1.0000 0.7297 1.0000 3.36e-13 4d1l-a2-m2-cB_4d1l-a2-m1-cA, 4d1l-a2-m2-cB_4d1l-a2-m2-cA
2 4d1l-a2-m2-cA 38 27 1.0000 0.7105 1.0000 3.61e-13 4d1l-a2-m2-cB_4d1l-a2-m2-cA
3 4d1l-a2-m1-cA 38 27 1.0000 0.7105 1.0000 3.61e-13 4d1l-a2-m2-cB_4d1l-a2-m1-cA
4 4cz6-a1-m1-cB 29 27 1.0000 0.9310 1.0000 4.48e-13 4cz6-a1-m1-cC_4cz6-a1-m1-cB
5 4cz6-a1-m1-cC 27 27 1.0000 1.0000 1.0000 5.41e-13 4cz6-a1-m1-cC_4cz6-a1-m1-cB
6 1pet-a1-m1-cD 31 27 0.6296 0.5484 0.6296 9.38e-08 1pet-a1-m1-cA_1pet-a1-m1-cD
7 1pet-a1-m1-cA 31 27 0.6296 0.5484 0.6296 9.38e-08 1pet-a1-m1-cA_1pet-a1-m1-cD
8 1sak-a1-m1-cD 42 27 0.6296 0.4048 0.6296 1.15e-07 1sak-a1-m1-cB_1sak-a1-m1-cD, 1sak-a1-m1-cC_1sak-a1-m1-cD
9 1sak-a1-m1-cC 42 27 0.6296 0.4048 0.6296 1.15e-07 1sak-a1-m1-cC_1sak-a1-m1-cD
10 1sak-a1-m1-cB 42 27 0.6296 0.4048 0.6296 1.15e-07 1sak-a1-m1-cB_1sak-a1-m1-cD
11 5xzc-a2-m1-cE 232 27 0.6296 0.0733 0.6296 1.51e-07 5xzc-a2-m1-cC_5xzc-a2-m1-cE
12 5xzc-a2-m1-cD 232 27 0.6296 0.0733 0.6296 1.51e-07 5xzc-a2-m1-cB_5xzc-a2-m1-cD
13 5xzc-a2-m1-cC 232 27 0.6296 0.0733 0.6296 1.51e-07 5xzc-a2-m1-cB_5xzc-a2-m1-cC, 5xzc-a2-m1-cC_5xzc-a2-m1-cE
14 5xzc-a2-m1-cB 232 27 0.6296 0.0733 0.6296 1.51e-07 5xzc-a2-m1-cB_5xzc-a2-m1-cC, 5xzc-a2-m1-cB_5xzc-a2-m1-cD
15 1a1u-a1-m1-cC 29 27 0.5926 0.5517 0.5926 1.87e-06 1a1u-a1-m1-cA_1a1u-a1-m1-cC
16 1a1u-a1-m1-cA 29 27 0.5926 0.5517 0.5926 1.87e-06 1a1u-a1-m1-cA_1a1u-a1-m1-cC
17 1hs5-a1-m1-cB 34 27 0.5926 0.4706 0.5926 3.76e-06 1hs5-a1-m1-cA_1hs5-a1-m1-cB
18 1hs5-a1-m1-cA 34 27 0.5926 0.4706 0.5926 3.76e-06 1hs5-a1-m1-cA_1hs5-a1-m1-cB
19 2j10-a1-m1-cC 31 27 0.5556 0.4839 0.5556 4.78e-06 2j10-a1-m1-cB_2j10-a1-m1-cC
20 2j10-a1-m1-cB 31 27 0.5556 0.4839 0.5556 4.78e-06 2j10-a1-m1-cB_2j10-a1-m1-cC
21 3q01-a1-m1-cB 233 27 0.5926 0.0687 0.5926 9.96e-06 3q01-a1-m1-cA_3q01-a1-m1-cB
22 3q01-a1-m1-cA 233 27 0.5926 0.0687 0.5926 9.96e-06 3q01-a1-m1-cA_3q01-a1-m1-cB
23 2wqj-a5-m1-c1 26 25 0.5926 0.6154 0.6400 9.01e-05 2wqj-a5-m1-c1_2wqj-a5-m1-cZ
24 2wqj-a1-m1-cL 26 25 0.5926 0.6154 0.6400 9.01e-05 2wqj-a1-m1-cL_2wqj-a1-m1-cJ
25 2wqj-a5-m1-cZ 31 25 0.5926 0.5161 0.6400 1.01e-04 2wqj-a5-m1-c1_2wqj-a5-m1-cZ, 2wqj-a5-m1-c2_2wqj-a5-m1-cZ
26 2wqj-a4-m1-cP 28 25 0.5926 0.5714 0.6400 1.12e-04 2wqj-a4-m1-cO_2wqj-a4-m1-cP
27 2wqj-a5-m1-c2 27 25 0.5926 0.5926 0.6400 1.16e-04 2wqj-a5-m1-c2_2wqj-a5-m1-cZ
28 2wqj-a4-m1-cO 27 25 0.5926 0.5926 0.6400 1.16e-04 2wqj-a4-m1-cO_2wqj-a4-m1-cP
29 2wqj-a1-m1-cJ 27 25 0.5926 0.5926 0.6400 1.16e-04 2wqj-a1-m1-cL_2wqj-a1-m1-cJ
30 2nb1-a1-m1-cD 50 25 0.5556 0.3000 0.6000 6.28e-04 2nb1-a1-m1-cB_2nb1-a1-m1-cD
31 2nb1-a1-m1-cB 50 25 0.5556 0.3000 0.6000 6.28e-04 2nb1-a1-m1-cB_2nb1-a1-m1-cD
32 3zy1-a1-m4-cA 40 25 0.5556 0.3750 0.6000 0.001 3zy1-a1-m1-cA_3zy1-a1-m4-cA, 3zy1-a1-m2-cA_3zy1-a1-m4-cA
33 3zy1-a1-m2-cA 40 25 0.5556 0.3750 0.6000 0.001 3zy1-a1-m2-cA_3zy1-a1-m4-cA
34 3zy1-a1-m1-cA 40 25 0.5556 0.3750 0.6000 0.001 3zy1-a1-m1-cA_3zy1-a1-m4-cA
35 7z73-a1-m1-cD 43 25 0.5556 0.3488 0.6000 0.001 7z73-a1-m1-cD_7z73-a1-m1-cC
36 7z73-a1-m1-cC 44 25 0.5556 0.3409 0.6000 0.001 7z73-a1-m1-cD_7z73-a1-m1-cC
37 4a9z-a1-m1-cB 45 25 0.5556 0.3333 0.6000 0.002 4a9z-a1-m1-cB_4a9z-a1-m1-cC
38 4a9z-a1-m1-cC 58 25 0.5556 0.2586 0.6000 0.002 4a9z-a1-m1-cB_4a9z-a1-m1-cC
39 2wtt-a4-m1-cO 39 25 0.5926 0.4103 0.6400 0.006 2wtt-a4-m1-cM_2wtt-a4-m1-cO
40 2wtt-a2-m1-cB 41 25 0.5926 0.3902 0.6400 0.006 2wtt-a2-m1-cA_2wtt-a2-m1-cB
41 2wtt-a2-m1-cA 40 25 0.5926 0.4000 0.6400 0.006 2wtt-a2-m1-cA_2wtt-a2-m1-cB
42 2nb1-a1-m1-cC 60 25 0.5185 0.2333 0.5600 0.007 2nb1-a1-m1-cA_2nb1-a1-m1-cC
43 2nb1-a1-m1-cA 60 25 0.5185 0.2333 0.5600 0.007 2nb1-a1-m1-cA_2nb1-a1-m1-cC
44 2wtt-a4-m1-cM 27 23 0.5926 0.5926 0.6957 0.007 2wtt-a4-m1-cM_2wtt-a4-m1-cO
45 5hob-a1-m1-cB 45 25 0.5185 0.3111 0.5600 0.010 5hob-a1-m1-cB_5hob-a1-m1-cC
46 5hob-a1-m1-cC 46 25 0.5185 0.3043 0.5600 0.010 5hob-a1-m1-cB_5hob-a1-m1-cC
47 3zy0-a1-m1-cD 24 24 0.5185 0.5833 0.5833 0.11 3zy0-a1-m1-cD_3zy0-a1-m1-cB
48 3zy0-a1-m1-cB 25 24 0.5185 0.5600 0.5833 0.12 3zy0-a1-m1-cD_3zy0-a1-m1-cB
49 2mw4-a1-m1-cD 47 26 0.3333 0.1915 0.3462 0.16 2mw4-a1-m1-cA_2mw4-a1-m1-cD, 2mw4-a1-m1-cB_2mw4-a1-m1-cD, 2mw4-a1-m1-cC_2mw4-a1-m1-cD
50 2mw4-a1-m1-cC 47 26 0.3333 0.1915 0.3462 0.16 2mw4-a1-m1-cC_2mw4-a1-m1-cD
51 2mw4-a1-m1-cB 47 26 0.3333 0.1915 0.3462 0.16 2mw4-a1-m1-cB_2mw4-a1-m1-cD
52 2mw4-a1-m1-cA 47 26 0.3333 0.1915 0.3462 0.16 2mw4-a1-m1-cA_2mw4-a1-m1-cD
53 4liu-a1-m2-cA 351 24 0.3333 0.0256 0.3750 3.2 4liu-a1-m1-cA_4liu-a1-m2-cA
54 4liu-a1-m1-cA 351 24 0.3333 0.0256 0.3750 3.2 4liu-a1-m1-cA_4liu-a1-m2-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600