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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=42)
EIKSLKHEIKELRKEKNDTLNNYDTLEEETDDLKNRLQALEK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7m2w-a1-m1-cX 42 42 1.0000 1.0000 1.0000 1.99e-22 7m2w-a1-m1-cX_7m2w-a1-m1-cY
2 7m2w-a1-m1-cU 42 42 1.0000 1.0000 1.0000 1.99e-22 7m2w-a1-m1-cU_7m2w-a1-m1-cK
3 7m2w-a1-m1-cY 95 42 1.0000 0.4421 1.0000 3.70e-22 7m2w-a1-m1-cX_7m2w-a1-m1-cY
4 7m2w-a1-m1-cK 95 42 1.0000 0.4421 1.0000 3.70e-22 7m2w-a1-m1-cU_7m2w-a1-m1-cK
5 7m3p-a1-m1-cB 164 42 1.0000 0.2561 1.0000 4.27e-22 7m3p-a1-m1-cB_7m3p-a1-m1-cA
6 7m3p-a1-m1-cA 168 42 1.0000 0.2500 1.0000 5.10e-22 7m3p-a1-m1-cB_7m3p-a1-m1-cA
7 1zbq-a3-m1-cF 302 32 0.2381 0.0331 0.3125 2.3 1zbq-a3-m1-cE_1zbq-a3-m1-cF
8 1zbq-a3-m1-cE 302 32 0.2381 0.0331 0.3125 2.3 1zbq-a3-m1-cE_1zbq-a3-m1-cF
9 2dfs-a1-m1-cM 994 34 0.3333 0.0141 0.4118 5.0 2dfs-a1-m1-cA_2dfs-a1-m1-cM
10 2dfs-a1-m1-cA 994 34 0.3333 0.0141 0.4118 5.0 2dfs-a1-m1-cA_2dfs-a1-m1-cM
11 2jgo-a1-m1-cB 29 20 0.2143 0.3103 0.4500 6.8 2jgo-a1-m1-cA_2jgo-a1-m1-cB
12 2jgo-a1-m1-cA 29 20 0.2143 0.3103 0.4500 6.8 2jgo-a1-m1-cA_2jgo-a1-m1-cB
13 3oa7-a1-m2-cA 188 40 0.2857 0.0638 0.3000 8.1 3oa7-a1-m1-cA_3oa7-a1-m2-cA
14 3oa7-a1-m1-cA 188 40 0.2857 0.0638 0.3000 8.1 3oa7-a1-m1-cA_3oa7-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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