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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=72)
EIPDYLCGKISFELMAEPCITPSGITYDRKDIEEHLQRVGHFDPVTRSPLTQDQLIPNLA
MKEVIDAFIQEN

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2oxq-a1-m1-cD 72 72 1.0000 1.0000 1.0000 5.67e-50 2oxq-a1-m1-cC_2oxq-a1-m1-cD
2 2oxq-a1-m1-cC 72 72 1.0000 1.0000 1.0000 5.67e-50 2oxq-a1-m1-cC_2oxq-a1-m1-cD
3 7vf6-a1-m1-cB 366 64 0.3056 0.0601 0.3438 0.045 7vf6-a1-m1-cA_7vf6-a1-m1-cB
4 7vf6-a1-m1-cA 366 64 0.3056 0.0601 0.3438 0.045 7vf6-a1-m1-cA_7vf6-a1-m1-cB
5 4xi1-a4-m2-cB 75 56 0.2639 0.2533 0.3393 0.073 4xi1-a4-m2-cB_4xi1-a4-m2-cA
6 4xi1-a4-m2-cC 75 56 0.2639 0.2533 0.3393 0.076 4xi1-a4-m2-cC_4xi1-a4-m2-cA
7 4xi1-a4-m2-cA 76 56 0.2639 0.2500 0.3393 0.081 4xi1-a4-m1-cA_4xi1-a4-m2-cA, 4xi1-a4-m2-cB_4xi1-a4-m2-cA, 4xi1-a4-m2-cC_4xi1-a4-m2-cA
8 4xi1-a4-m1-cA 76 56 0.2639 0.2500 0.3393 0.081 4xi1-a4-m1-cA_4xi1-a4-m2-cA
9 3hcs-a1-m1-cB 157 51 0.2083 0.0955 0.2941 0.14 3hcs-a1-m1-cA_3hcs-a1-m1-cB
10 3hcs-a1-m1-cA 157 51 0.2083 0.0955 0.2941 0.14 3hcs-a1-m1-cA_3hcs-a1-m1-cB
11 3jb9-a1-m1-cU 430 49 0.2500 0.0419 0.3673 0.42 3jb9-a1-m1-cS_3jb9-a1-m1-cU, 3jb9-a1-m1-cV_3jb9-a1-m1-cU
12 3jb9-a1-m1-cS 132 49 0.2500 0.1364 0.3673 1.8 3jb9-a1-m1-cS_3jb9-a1-m1-cU, 3jb9-a1-m1-cV_3jb9-a1-m1-cS
13 3jb9-a1-m1-cV 131 49 0.2500 0.1374 0.3673 1.9 3jb9-a1-m1-cV_3jb9-a1-m1-cS, 3jb9-a1-m1-cV_3jb9-a1-m1-cU
14 4n9k-a1-m1-cB 256 49 0.1944 0.0547 0.2857 2.2 4n9k-a1-m1-cA_4n9k-a1-m1-cB
15 4n9k-a1-m1-cA 256 49 0.1944 0.0547 0.2857 2.2 4n9k-a1-m1-cA_4n9k-a1-m1-cB
16 1i2w-a1-m1-cA 255 49 0.1944 0.0549 0.2857 2.4 1i2w-a1-m1-cA_1i2w-a1-m1-cB
17 1i2w-a1-m1-cB 256 49 0.1944 0.0547 0.2857 2.4 1i2w-a1-m1-cA_1i2w-a1-m1-cB
18 5vnz-a1-m2-cA 108 51 0.1944 0.1296 0.2745 2.7 5vnz-a1-m1-cA_5vnz-a1-m2-cA
19 5vnz-a1-m1-cA 108 51 0.1944 0.1296 0.2745 2.7 5vnz-a1-m1-cA_5vnz-a1-m2-cA
20 5xai-a1-m1-cB 192 36 0.1806 0.0677 0.3611 2.7 5xai-a1-m1-cB_5xai-a1-m1-cA
21 5xai-a1-m1-cA 194 36 0.1806 0.0670 0.3611 2.8 5xai-a1-m1-cB_5xai-a1-m1-cA
22 2pbr-a1-m1-cB 195 36 0.1806 0.0667 0.3611 2.9 2pbr-a1-m1-cA_2pbr-a1-m1-cB
23 2pbr-a1-m1-cA 195 36 0.1806 0.0667 0.3611 2.9 2pbr-a1-m1-cA_2pbr-a1-m1-cB
24 8apz-a1-m1-cB 410 14 0.1250 0.0220 0.6429 3.2 8apz-a1-m1-cB_8apz-a1-m1-cA
25 8apz-a1-m1-cA 412 14 0.1250 0.0218 0.6429 3.2 8apz-a1-m1-cB_8apz-a1-m1-cA
26 3tai-a1-m1-cA 423 35 0.1528 0.0260 0.3143 4.1 3tai-a1-m1-cA_3tai-a1-m1-cB
27 3tai-a1-m1-cB 423 35 0.1528 0.0260 0.3143 4.4 3tai-a1-m1-cA_3tai-a1-m1-cB
28 1l1q-a1-m2-cA 181 46 0.1806 0.0718 0.2826 5.8 1l1q-a1-m1-cA_1l1q-a1-m2-cA
29 1l1q-a1-m1-cA 181 46 0.1806 0.0718 0.2826 5.8 1l1q-a1-m1-cA_1l1q-a1-m2-cA
30 4dmg-a1-m1-cB 385 37 0.1667 0.0312 0.3243 7.1 4dmg-a1-m1-cA_4dmg-a1-m1-cB
31 4dmg-a1-m1-cA 385 37 0.1667 0.0312 0.3243 7.1 4dmg-a1-m1-cA_4dmg-a1-m1-cB
32 4bdu-a2-m3-cD 295 48 0.1944 0.0475 0.2917 7.1 4bdu-a2-m1-cD_4bdu-a2-m3-cD, 4bdu-a2-m3-cC_4bdu-a2-m3-cD
33 4bdu-a2-m3-cC 295 48 0.1944 0.0475 0.2917 7.1 4bdu-a2-m3-cC_4bdu-a2-m3-cD
34 4bdu-a2-m1-cD 295 48 0.1944 0.0475 0.2917 7.1 4bdu-a2-m1-cD_4bdu-a2-m3-cD
35 1ox0-a1-m2-cA 414 39 0.1667 0.0290 0.3077 8.5 1ox0-a1-m1-cA_1ox0-a1-m2-cA
36 1ox0-a1-m1-cA 414 39 0.1667 0.0290 0.3077 8.5 1ox0-a1-m1-cA_1ox0-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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