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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=95)
EIRKLNEKEPVYIYTSFHMIPRTARLCTILTANRIPFTYRDLGTDDEARKVWKTFSKGRS
LPGVVRGHNDLIGNWEEIEEANEDYKLRELIYDTI

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6abs-a1-m1-cA 98 95 1.0000 0.9694 1.0000 8.25e-68 6abs-a1-m1-cB_6abs-a1-m1-cA
2 6abs-a1-m1-cB 95 95 1.0000 1.0000 1.0000 1.40e-67 6abs-a1-m1-cB_6abs-a1-m1-cA
3 6abr-a1-m1-cA 96 96 0.9368 0.9271 0.9271 4.16e-60 6abr-a1-m1-cB_6abr-a1-m1-cA
4 6abr-a1-m1-cB 85 85 0.8526 0.9529 0.9529 2.66e-56 6abr-a1-m1-cB_6abr-a1-m1-cA
5 6m4c-a1-m2-cA 98 98 0.6000 0.5816 0.5816 4.70e-35 6m4c-a1-m1-cA_6m4c-a1-m2-cA
6 6m4c-a1-m1-cA 98 98 0.6000 0.5816 0.5816 4.70e-35 6m4c-a1-m1-cA_6m4c-a1-m2-cA
7 8ihp-a1-m1-cJ 417 48 0.1579 0.0360 0.3125 0.41 8ihp-a1-m1-cG_8ihp-a1-m1-cJ
8 8ihp-a1-m1-cG 417 48 0.1579 0.0360 0.3125 0.41 8ihp-a1-m1-cG_8ihp-a1-m1-cJ
9 5ed4-a2-m1-cF 214 43 0.1474 0.0654 0.3256 0.83 5ed4-a2-m1-cF_5ed4-a2-m1-cE
10 1nwp-a3-m3-cA 128 57 0.1368 0.1016 0.2281 1.3 1nwp-a3-m1-cB_1nwp-a3-m3-cA
11 1nwp-a3-m1-cB 128 57 0.1368 0.1016 0.2281 1.3 1nwp-a3-m1-cB_1nwp-a3-m3-cA
12 1nwp-a2-m2-cB 128 57 0.1368 0.1016 0.2281 1.3 1nwp-a2-m1-cA_1nwp-a2-m2-cB
13 1nwp-a2-m1-cA 128 57 0.1368 0.1016 0.2281 1.3 1nwp-a2-m1-cA_1nwp-a2-m2-cB
14 1nwp-a1-m1-cB 128 57 0.1368 0.1016 0.2281 1.3 1nwp-a1-m1-cA_1nwp-a1-m1-cB
15 1nwp-a1-m1-cA 128 57 0.1368 0.1016 0.2281 1.3 1nwp-a1-m1-cA_1nwp-a1-m1-cB
16 1f6b-a1-m1-cB 180 26 0.1263 0.0667 0.4615 1.9 1f6b-a1-m1-cA_1f6b-a1-m1-cB
17 5ju6-a1-m1-cD 835 46 0.1684 0.0192 0.3478 2.7 5ju6-a1-m1-cA_5ju6-a1-m1-cD, 5ju6-a1-m1-cC_5ju6-a1-m1-cD
18 5ju6-a1-m1-cC 835 46 0.1684 0.0192 0.3478 2.7 5ju6-a1-m1-cA_5ju6-a1-m1-cC, 5ju6-a1-m1-cC_5ju6-a1-m1-cD
19 5ju6-a1-m1-cA 835 46 0.1684 0.0192 0.3478 2.7 5ju6-a1-m1-cA_5ju6-a1-m1-cC, 5ju6-a1-m1-cA_5ju6-a1-m1-cD
20 3r0j-a1-m1-cB 218 43 0.1474 0.0642 0.3256 5.3 3r0j-a1-m1-cB_3r0j-a1-m1-cA
21 3r0j-a1-m1-cA 221 45 0.1474 0.0633 0.3111 5.5 3r0j-a1-m1-cB_3r0j-a1-m1-cA
22 5ed4-a2-m1-cE 224 45 0.1474 0.0625 0.3111 7.0 5ed4-a2-m1-cF_5ed4-a2-m1-cE

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Reference:
Jacob Schwartz et al.

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