Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=80)
EISGHIVRSPMVGTFYRTPSPDAKAFIEVGQKVNVGDTLCIVEAMKMMNQIEADKSGTVK
AILVESGQPVEFDEPLVVIE

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1bdo-a1-m2-cA 80 80 1.0000 1.0000 1.0000 1.41e-54 1bdo-a1-m1-cA_1bdo-a1-m2-cA
2 1bdo-a1-m1-cA 80 80 1.0000 1.0000 1.0000 1.41e-54 1bdo-a1-m1-cA_1bdo-a1-m2-cA
3 5ks8-a1-m1-cC 603 54 0.3375 0.0448 0.5000 1.47e-09 5ks8-a1-m1-cD_5ks8-a1-m1-cC
4 5ks8-a1-m1-cD 580 54 0.3375 0.0466 0.5000 1.69e-09 5ks8-a1-m1-cD_5ks8-a1-m1-cC
5 3hbl-a1-m1-cB 1074 54 0.2375 0.0177 0.3519 0.003 3hbl-a1-m1-cB_3hbl-a1-m1-cA
6 3hbl-a1-m1-cA 1131 54 0.2375 0.0168 0.3519 0.003 3hbl-a1-m1-cB_3hbl-a1-m1-cA
7 2qf7-a1-m2-cA 1075 72 0.2875 0.0214 0.3194 0.19 2qf7-a1-m1-cA_2qf7-a1-m2-cA
8 2qf7-a1-m1-cA 1075 72 0.2875 0.0214 0.3194 0.19 2qf7-a1-m1-cA_2qf7-a1-m2-cA
9 5fo3-a1-m1-cB 158 82 0.2750 0.1392 0.2683 0.22 5fo3-a1-m1-cA_5fo3-a1-m1-cB
10 5fo3-a1-m1-cA 158 82 0.2750 0.1392 0.2683 0.22 5fo3-a1-m1-cA_5fo3-a1-m1-cB
11 4foi-a1-m1-cB 899 28 0.1375 0.0122 0.3929 5.6 4foi-a1-m1-cA_4foi-a1-m1-cB
12 4foi-a1-m1-cA 899 28 0.1375 0.0122 0.3929 5.6 4foi-a1-m1-cA_4foi-a1-m1-cB
13 7px0-a2-m1-cD 1236 57 0.2375 0.0154 0.3333 6.5 7px0-a2-m1-cD_7px0-a2-m1-cC
14 7px0-a2-m1-cC 1252 57 0.2375 0.0152 0.3333 6.8 7px0-a2-m1-cD_7px0-a2-m1-cC
15 4dk0-a2-m6-cA 321 34 0.1125 0.0280 0.2647 7.3 4dk0-a2-m2-cA_4dk0-a2-m6-cA
16 4dk0-a2-m2-cA 321 34 0.1125 0.0280 0.2647 7.3 4dk0-a2-m2-cA_4dk0-a2-m6-cA
17 4dk0-a1-m9-cA 321 34 0.1125 0.0280 0.2647 7.3 4dk0-a1-m2-cA_4dk0-a1-m9-cA, 4dk0-a1-m4-cA_4dk0-a1-m9-cA
18 4dk0-a1-m4-cA 321 34 0.1125 0.0280 0.2647 7.3 4dk0-a1-m4-cA_4dk0-a1-m9-cA
19 4dk0-a1-m2-cA 321 34 0.1125 0.0280 0.2647 7.3 4dk0-a1-m2-cA_4dk0-a1-m9-cA
20 2nzt-a1-m1-cA 871 28 0.1125 0.0103 0.3214 9.5 2nzt-a1-m1-cB_2nzt-a1-m1-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600