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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=55)
EIVKTKRFAIKPSEEEAVLEELLGHNFFVFQNGDSNEVNVVYKRKDGNYGLIEPE

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3ka5-a1-m1-cA 55 55 1.0000 1.0000 1.0000 1.02e-34 3ka5-a1-m1-cA_3ka5-a1-m1-cB
2 3ka5-a1-m1-cB 57 55 1.0000 0.9649 1.0000 1.03e-34 3ka5-a1-m1-cA_3ka5-a1-m1-cB
3 6gzz-a1-m1-cX3 57 55 0.6182 0.5965 0.6182 1.56e-19 6gzz-a1-m1-cW4_6gzz-a1-m1-cX3
4 6gzz-a1-m1-cW4 57 55 0.6182 0.5965 0.6182 1.56e-19 6gzz-a1-m1-cW4_6gzz-a1-m1-cX3
5 6gzx-a1-m1-cX3 57 55 0.6182 0.5965 0.6182 1.56e-19 6gzx-a1-m1-cW4_6gzx-a1-m1-cX3
6 6gzx-a1-m1-cW4 57 55 0.6182 0.5965 0.6182 1.56e-19 6gzx-a1-m1-cW4_6gzx-a1-m1-cX3
7 6t7o-a1-m1-cB 58 54 0.5091 0.4828 0.5185 7.98e-17 6t7o-a1-m1-cB_6t7o-a1-m1-cA
8 3lyv-a4-m1-cB 56 55 0.4727 0.4643 0.4727 3.39e-16 3lyv-a4-m1-cB_3lyv-a4-m3-cA
9 3lyv-a4-m3-cA 57 55 0.4727 0.4561 0.4727 3.62e-16 3lyv-a4-m1-cB_3lyv-a4-m3-cA
10 6t7o-a1-m1-cA 59 55 0.5273 0.4915 0.5273 1.37e-15 6t7o-a1-m1-cB_6t7o-a1-m1-cA
11 6fxc-a1-m1-cBv 162 56 0.5273 0.1790 0.5179 2.70e-14 6fxc-a1-m1-cAv_6fxc-a1-m1-cBv
12 6fxc-a1-m1-cAv 162 56 0.5273 0.1790 0.5179 2.70e-14 6fxc-a1-m1-cAv_6fxc-a1-m1-cBv
13 6t4r-a1-m1-cCCC 210 39 0.2909 0.0762 0.4103 2.6 6t4r-a1-m1-cCCC_6t4r-a1-m1-cAAA
14 6t4r-a1-m1-cAAA 212 39 0.2909 0.0755 0.4103 2.6 6t4r-a1-m1-cCCC_6t4r-a1-m1-cAAA

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Reference:
Jacob Schwartz et al.

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