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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=86)
EKKIDGRRKAAVLLVALGPEKAAQVKHLDEETVEQLVVEIANIGRVTPEEKKQVLEEFLS
LAKAKEISEGGIEYAKKVLEKAFGPE

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5tdy-a4-m3-cD 86 86 1.0000 1.0000 1.0000 1.49e-54 5tdy-a4-m3-cD_5tdy-a4-m1-cB
2 5tdy-a3-m2-cD 86 86 1.0000 1.0000 1.0000 1.49e-54 5tdy-a3-m2-cD_5tdy-a3-m1-cB
3 5tdy-a4-m1-cB 93 85 0.9884 0.9140 1.0000 6.11e-54 5tdy-a4-m3-cD_5tdy-a4-m1-cB
4 5tdy-a3-m1-cB 93 85 0.9884 0.9140 1.0000 6.11e-54 5tdy-a3-m2-cD_5tdy-a3-m1-cB
5 5d01-a1-m1-cB 360 45 0.1860 0.0444 0.3556 0.51 5d01-a1-m1-cA_5d01-a1-m1-cB
6 5d01-a1-m1-cA 357 41 0.1628 0.0392 0.3415 2.5 5d01-a1-m1-cA_5d01-a1-m1-cB
7 4eo9-a1-m2-cA 240 33 0.1744 0.0625 0.4545 3.9 4eo9-a1-m1-cA_4eo9-a1-m2-cA
8 4eo9-a1-m1-cA 240 33 0.1744 0.0625 0.4545 3.9 4eo9-a1-m1-cA_4eo9-a1-m2-cA
9 3usy-a4-m3-cB 226 67 0.1744 0.0664 0.2239 4.1 3usy-a4-m1-cB_3usy-a4-m3-cB
10 3usy-a4-m1-cB 226 67 0.1744 0.0664 0.2239 4.1 3usy-a4-m1-cB_3usy-a4-m3-cB
11 7awe-a1-m1-cV 199 29 0.1047 0.0452 0.3103 4.8 7awe-a1-m1-cH_7awe-a1-m1-cV
12 7awe-a1-m1-cH 199 29 0.1047 0.0452 0.3103 4.8 7awe-a1-m1-cH_7awe-a1-m1-cV
13 5lfk-a1-m2-cA 243 37 0.1163 0.0412 0.2703 8.7 5lfk-a1-m1-cA_5lfk-a1-m2-cA, 5lfk-a1-m2-cB_5lfk-a1-m2-cA
14 5lfk-a1-m1-cA 243 37 0.1163 0.0412 0.2703 8.7 5lfk-a1-m1-cA_5lfk-a1-m2-cA, 5lfk-a1-m2-cB_5lfk-a1-m1-cA
15 5lfk-a1-m2-cB 235 37 0.1163 0.0426 0.2703 9.2 5lfk-a1-m1-cB_5lfk-a1-m2-cB, 5lfk-a1-m2-cB_5lfk-a1-m1-cA, 5lfk-a1-m2-cB_5lfk-a1-m2-cA
16 5lfk-a1-m1-cB 235 37 0.1163 0.0426 0.2703 9.2 5lfk-a1-m1-cB_5lfk-a1-m2-cB
17 4biu-a3-m1-cF 250 37 0.1163 0.0400 0.2703 9.6 4biu-a3-m1-cE_4biu-a3-m1-cF

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Reference:
Jacob Schwartz et al.

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