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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=80)
EKRFYILTIVVEDREKAYRQVNELLHNFSEDILLRVGYPVREENAIIFLVLKTDNDTIGA
LSGKLGQISGVRVKTVPLKR

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2nzc-a1-m1-cB 80 80 1.0000 1.0000 1.0000 2.06e-53 2nzc-a1-m1-cB_2nzc-a1-m1-cD
2 2nzc-a1-m1-cC 79 79 0.9875 1.0000 1.0000 9.93e-53 2nzc-a1-m1-cC_2nzc-a1-m1-cD
3 2nzc-a1-m1-cD 80 79 0.9875 0.9875 1.0000 1.21e-52 2nzc-a1-m1-cB_2nzc-a1-m1-cD, 2nzc-a1-m1-cC_2nzc-a1-m1-cD
4 3kv3-a1-m1-cR 334 70 0.2625 0.0629 0.3000 3.7 3kv3-a1-m1-cP_3kv3-a1-m1-cR
5 3kv3-a1-m1-cQ 334 70 0.2625 0.0629 0.3000 3.7 3kv3-a1-m1-cP_3kv3-a1-m1-cQ
6 3kv3-a1-m1-cP 334 70 0.2625 0.0629 0.3000 3.7 3kv3-a1-m1-cO_3kv3-a1-m1-cP, 3kv3-a1-m1-cP_3kv3-a1-m1-cQ, 3kv3-a1-m1-cP_3kv3-a1-m1-cR
7 3kv3-a1-m1-cO 334 70 0.2625 0.0629 0.3000 3.7 3kv3-a1-m1-cO_3kv3-a1-m1-cP

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Reference:
Jacob Schwartz et al.

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