Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=27)
ELAAIKEELAAIKELAAIKQELAAIKQ

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5u5c-a2-m2-cF 27 27 1.0000 1.0000 1.0000 2.72e-09 5u5c-a2-m2-cE_5u5c-a2-m2-cF
2 5u5c-a2-m2-cE 27 27 1.0000 1.0000 1.0000 2.72e-09 5u5c-a2-m2-cE_5u5c-a2-m2-cF
3 3r4h-a2-m2-cF 28 28 0.9259 0.8929 0.8929 1.92e-04 3r4h-a2-m1-cE_3r4h-a2-m2-cF, 3r4h-a2-m2-cE_3r4h-a2-m2-cF
4 3r4h-a2-m2-cE 26 20 0.7037 0.7308 0.9500 1.96e-04 3r4h-a2-m2-cE_3r4h-a2-m2-cF
5 3r4h-a2-m2-cE 26 27 0.8889 0.9231 0.8889 0.001 3r4h-a2-m2-cE_3r4h-a2-m2-cF
6 3r4h-a2-m1-cE 26 20 0.7037 0.7308 0.9500 1.96e-04 3r4h-a2-m1-cE_3r4h-a2-m2-cF
7 3r4h-a2-m1-cE 26 27 0.8889 0.9231 0.8889 0.001 3r4h-a2-m1-cE_3r4h-a2-m2-cF
8 7qdk-a1-m1-cC 29 27 0.7407 0.6897 0.7407 3.40e-04 7qdk-a1-m1-cB_7qdk-a1-m1-cC
9 7qdk-a1-m1-cC 29 21 0.5556 0.5172 0.7143 0.72 7qdk-a1-m1-cB_7qdk-a1-m1-cC
10 7qdk-a1-m1-cB 29 27 0.7407 0.6897 0.7407 3.40e-04 7qdk-a1-m1-cB_7qdk-a1-m1-cC
11 7qdk-a1-m1-cB 29 21 0.5556 0.5172 0.7143 0.72 7qdk-a1-m1-cB_7qdk-a1-m1-cC
12 7l33-a3-m7-cC 30 26 0.7407 0.6667 0.7692 0.001 7l33-a3-m4-cC_7l33-a3-m7-cC
13 7l33-a3-m7-cC 30 20 0.5926 0.5333 0.8000 0.38 7l33-a3-m4-cC_7l33-a3-m7-cC
14 7l33-a3-m7-cC 30 22 0.5926 0.5333 0.7273 0.56 7l33-a3-m4-cC_7l33-a3-m7-cC
15 7l33-a3-m4-cC 30 26 0.7407 0.6667 0.7692 0.001 7l33-a3-m4-cC_7l33-a3-m7-cC
16 7l33-a3-m4-cC 30 20 0.5926 0.5333 0.8000 0.38 7l33-a3-m4-cC_7l33-a3-m7-cC
17 7l33-a3-m4-cC 30 22 0.5926 0.5333 0.7273 0.56 7l33-a3-m4-cC_7l33-a3-m7-cC
18 4dzk-a1-m3-cA 29 28 0.7407 0.6897 0.7143 0.001 4dzk-a1-m2-cA_4dzk-a1-m3-cA
19 4dzk-a1-m2-cA 29 28 0.7407 0.6897 0.7143 0.001 4dzk-a1-m2-cA_4dzk-a1-m3-cA
20 6i1j-a2-m6-cA 30 28 0.7407 0.6667 0.7143 0.002 6i1j-a2-m1-cA_6i1j-a2-m6-cA, 6i1j-a2-m2-cA_6i1j-a2-m6-cA
21 6i1j-a2-m2-cA 30 28 0.7407 0.6667 0.7143 0.002 6i1j-a2-m2-cA_6i1j-a2-m6-cA
22 6i1j-a2-m1-cA 30 28 0.7407 0.6667 0.7143 0.002 6i1j-a2-m1-cA_6i1j-a2-m6-cA
23 4dzn-a1-m1-cB 31 28 0.6296 0.5484 0.6071 0.31 4dzn-a1-m1-cA_4dzn-a1-m1-cB
24 4dzn-a1-m1-cA 31 28 0.6296 0.5484 0.6071 0.31 4dzn-a1-m1-cA_4dzn-a1-m1-cB
25 4dzm-a2-m3-cB 30 27 0.5185 0.4667 0.5185 0.44 4dzm-a2-m1-cB_4dzm-a2-m3-cB
26 4dzm-a2-m1-cB 30 27 0.5185 0.4667 0.5185 0.44 4dzm-a2-m1-cB_4dzm-a2-m3-cB
27 5u59-a1-m2-cA 26 26 0.5185 0.5385 0.5385 0.62 5u59-a1-m1-cA_5u59-a1-m2-cA
28 5u59-a1-m2-cA 26 20 0.4444 0.4615 0.6000 0.86 5u59-a1-m1-cA_5u59-a1-m2-cA
29 5u59-a1-m1-cA 26 26 0.5185 0.5385 0.5385 0.62 5u59-a1-m1-cA_5u59-a1-m2-cA
30 5u59-a1-m1-cA 26 20 0.4444 0.4615 0.6000 0.86 5u59-a1-m1-cA_5u59-a1-m2-cA
31 1g6u-a2-m3-cB 48 27 0.5556 0.3125 0.5556 3.9 1g6u-a2-m1-cA_1g6u-a2-m3-cB, 1g6u-a2-m3-cA_1g6u-a2-m3-cB
32 1g6u-a2-m3-cA 48 27 0.5556 0.3125 0.5556 3.9 1g6u-a2-m3-cA_1g6u-a2-m3-cB
33 1g6u-a2-m1-cA 48 27 0.5556 0.3125 0.5556 3.9 1g6u-a2-m1-cA_1g6u-a2-m3-cB
34 7tdj-a1-m1-cD 4133 19 0.3704 0.0024 0.5263 7.3 7tdj-a1-m1-cC_7tdj-a1-m1-cD
35 7tdj-a1-m1-cC 4133 19 0.3704 0.0024 0.5263 7.3 7tdj-a1-m1-cC_7tdj-a1-m1-cD

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600