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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=93)
ELALYEIRKYQRSTDLLISKIPFARLVKEVTDEFTTKDQDLRWQSMAIMALQEASEAYLV
GLLEHTNLLALHAKRITIMKKDMQLARRIRGQF

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6uph-a1-m1-cA 93 93 1.0000 1.0000 1.0000 2.03e-64 6uph-a1-m1-cA_6uph-a1-m1-cE
2 6uph-a1-m1-cE 97 93 1.0000 0.9588 1.0000 2.43e-64 6uph-a1-m1-cA_6uph-a1-m1-cE
3 2yfw-a2-m1-cE 88 91 0.8710 0.9205 0.8901 2.51e-53 2yfw-a2-m1-cC_2yfw-a2-m1-cE
4 2yfw-a2-m1-cC 71 78 0.7204 0.9437 0.8590 5.32e-42 2yfw-a2-m1-cC_2yfw-a2-m1-cE
5 8f86-a1-m1-cE 95 91 0.6667 0.6526 0.6813 2.20e-39 8f86-a1-m1-cE_8f86-a1-m1-cA
6 8f86-a1-m1-cA 107 91 0.6667 0.5794 0.6813 2.22e-39 8f86-a1-m1-cE_8f86-a1-m1-cA
7 4jjn-a1-m1-cA 98 91 0.6129 0.5816 0.6264 3.49e-35 4jjn-a1-m1-cE_4jjn-a1-m1-cA
8 7z0o-a1-m1-cC 97 91 0.6129 0.5876 0.6264 4.17e-35 7z0o-a1-m1-cA_7z0o-a1-m1-cC
9 4jjn-a1-m1-cE 96 91 0.6129 0.5938 0.6264 4.18e-35 4jjn-a1-m1-cE_4jjn-a1-m1-cA
10 5zbx-a1-m1-cE 101 91 0.6022 0.5545 0.6154 5.90e-35 5zbx-a1-m1-cA_5zbx-a1-m1-cE
11 7z0o-a1-m1-cA 94 90 0.6129 0.6064 0.6333 7.54e-35 7z0o-a1-m1-cA_7z0o-a1-m1-cC
12 5ay8-a1-m1-cA 97 89 0.6237 0.5979 0.6517 1.14e-34 5ay8-a1-m1-cE_5ay8-a1-m1-cA
13 5ay8-a1-m1-cE 96 89 0.6237 0.6042 0.6517 1.17e-34 5ay8-a1-m1-cE_5ay8-a1-m1-cA
14 5zbx-a1-m1-cA 95 91 0.6022 0.5895 0.6154 1.19e-34 5zbx-a1-m1-cA_5zbx-a1-m1-cE
15 7y7i-a1-m1-cE 97 90 0.5699 0.5464 0.5889 1.86e-32 7y7i-a1-m1-cE_7y7i-a1-m1-cA
16 7y7i-a1-m1-cA 102 90 0.5699 0.5196 0.5889 2.38e-32 7y7i-a1-m1-cE_7y7i-a1-m1-cA
17 6kxv-a1-m1-cA 94 91 0.5591 0.5532 0.5714 7.40e-31 6kxv-a1-m1-cA_6kxv-a1-m1-cE
18 6kxv-a1-m1-cE 95 91 0.5591 0.5474 0.5714 8.32e-31 6kxv-a1-m1-cA_6kxv-a1-m1-cE
19 7d69-a1-m1-cE 99 88 0.4946 0.4646 0.5227 2.78e-27 7d69-a1-m1-cA_7d69-a1-m1-cE
20 7d69-a1-m1-cA 90 84 0.4839 0.5000 0.5357 1.19e-26 7d69-a1-m1-cA_7d69-a1-m1-cE
21 6xwt-a1-m1-cC 74 69 0.2903 0.3649 0.3913 4.81e-10 6xwt-a1-m1-cA_6xwt-a1-m1-cC
22 6xwt-a1-m1-cA 74 69 0.2903 0.3649 0.3913 4.81e-10 6xwt-a1-m1-cA_6xwt-a1-m1-cC
23 7lv9-a1-m1-cE 102 81 0.2688 0.2451 0.3086 0.001 7lv9-a1-m1-cA_7lv9-a1-m1-cE
24 7lv9-a1-m1-cA 102 81 0.2688 0.2451 0.3086 0.001 7lv9-a1-m1-cA_7lv9-a1-m1-cE
25 5gx8-a3-m1-cB 473 53 0.1290 0.0254 0.2264 1.9 5gx8-a3-m1-cA_5gx8-a3-m1-cB
26 5gx8-a3-m1-cA 473 53 0.1290 0.0254 0.2264 1.9 5gx8-a3-m1-cA_5gx8-a3-m1-cB
27 2e4z-a1-m2-cA 434 39 0.1290 0.0276 0.3077 8.0 2e4z-a1-m1-cA_2e4z-a1-m2-cA
28 2e4z-a1-m1-cA 434 39 0.1290 0.0276 0.3077 8.0 2e4z-a1-m1-cA_2e4z-a1-m2-cA
29 6fij-a1-m1-cB 1275 48 0.1398 0.0102 0.2708 8.6 6fij-a1-m1-cA_6fij-a1-m1-cB
30 6fij-a1-m1-cA 1275 48 0.1398 0.0102 0.2708 8.6 6fij-a1-m1-cA_6fij-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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