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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=95)
ELAQLQASAEQAAALLKAMSHPKRLLILCMLSGSPGTSAGELTRITGLSASATSQHLARM
RDEGLIDSQRDAQRILYSIKNEAVNAIIATLKNVY

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3cuo-a2-m1-cC 95 95 1.0000 1.0000 1.0000 1.40e-64 3cuo-a2-m1-cD_3cuo-a2-m1-cC
2 3cuo-a2-m1-cD 94 94 0.9895 1.0000 1.0000 1.94e-63 3cuo-a2-m1-cD_3cuo-a2-m1-cC
3 4ooi-a1-m1-cB 96 94 0.4000 0.3958 0.4043 3.08e-18 4ooi-a1-m1-cA_4ooi-a1-m1-cB
4 4ooi-a1-m1-cA 95 94 0.4000 0.4000 0.4043 3.10e-18 4ooi-a1-m1-cA_4ooi-a1-m1-cB
5 4omz-a2-m1-cC 100 87 0.4105 0.3900 0.4483 1.96e-16 4omz-a2-m1-cD_4omz-a2-m1-cC
6 4omz-a2-m1-cD 98 87 0.4105 0.3980 0.4483 2.08e-16 4omz-a2-m1-cD_4omz-a2-m1-cC
7 3jth-a1-m1-cB 88 77 0.3579 0.3864 0.4416 9.53e-13 3jth-a1-m1-cB_3jth-a1-m1-cA
8 3jth-a1-m1-cA 92 77 0.3579 0.3696 0.4416 1.01e-12 3jth-a1-m1-cB_3jth-a1-m1-cA
9 3pqk-a3-m1-cF 99 91 0.2737 0.2626 0.2857 1.65e-11 3pqk-a3-m1-cF_3pqk-a3-m1-cE
10 3pqk-a3-m1-cE 100 91 0.2737 0.2600 0.2857 1.80e-11 3pqk-a3-m1-cF_3pqk-a3-m1-cE
11 6o8l-a1-m2-cA 92 88 0.3684 0.3804 0.3977 3.02e-11 6o8l-a1-m1-cA_6o8l-a1-m2-cA
12 6o8l-a1-m1-cA 92 88 0.3684 0.3804 0.3977 3.02e-11 6o8l-a1-m1-cA_6o8l-a1-m2-cA
13 7p6f-a3-m3-cDDD 97 74 0.2947 0.2887 0.3784 2.47e-08 7p6f-a3-m1-cDDD_7p6f-a3-m3-cDDD
14 7p6f-a3-m1-cDDD 97 74 0.2947 0.2887 0.3784 2.47e-08 7p6f-a3-m1-cDDD_7p6f-a3-m3-cDDD
15 6j0e-a1-m1-cB 125 88 0.3053 0.2320 0.3295 8.23e-08 6j0e-a1-m1-cA_6j0e-a1-m1-cB
16 6j0e-a1-m1-cA 124 88 0.3053 0.2339 0.3295 8.62e-08 6j0e-a1-m1-cA_6j0e-a1-m1-cB
17 6jmi-a1-m1-cA 100 83 0.2842 0.2700 0.3253 2.91e-06 6jmi-a1-m1-cD_6jmi-a1-m1-cA
18 2lkp-a1-m1-cB 119 77 0.2737 0.2185 0.3377 4.78e-06 2lkp-a1-m1-cA_2lkp-a1-m1-cB
19 2lkp-a1-m1-cA 119 77 0.2737 0.2185 0.3377 4.78e-06 2lkp-a1-m1-cA_2lkp-a1-m1-cB
20 3f6o-a1-m1-cB 91 82 0.2211 0.2308 0.2561 0.003 3f6o-a1-m1-cB_3f6o-a1-m1-cA
21 3f6o-a2-m2-cA 97 82 0.2211 0.2165 0.2561 0.003 3f6o-a2-m1-cA_3f6o-a2-m2-cA
22 3f6o-a2-m1-cA 97 82 0.2211 0.2165 0.2561 0.003 3f6o-a2-m1-cA_3f6o-a2-m2-cA
23 3f6o-a1-m1-cA 97 82 0.2211 0.2165 0.2561 0.003 3f6o-a1-m1-cB_3f6o-a1-m1-cA
24 6j05-a1-m1-cB 90 83 0.2526 0.2667 0.2892 0.004 6j05-a1-m1-cB_6j05-a1-m1-cA
25 6j05-a1-m1-cA 101 83 0.2526 0.2376 0.2892 0.009 6j05-a1-m1-cB_6j05-a1-m1-cA
26 2p4w-a1-m1-cB 198 78 0.2526 0.1212 0.3077 0.046 2p4w-a1-m1-cA_2p4w-a1-m1-cB
27 2p4w-a1-m1-cA 197 78 0.2526 0.1218 0.3077 0.047 2p4w-a1-m1-cA_2p4w-a1-m1-cB
28 2jsc-a1-m1-cA 96 72 0.2421 0.2396 0.3194 0.10 2jsc-a1-m1-cA_2jsc-a1-m1-cB
29 2jsc-a1-m1-cB 97 72 0.2421 0.2371 0.3194 0.11 2jsc-a1-m1-cA_2jsc-a1-m1-cB
30 3f72-a2-m1-cC 103 74 0.2000 0.1845 0.2568 0.24 3f72-a2-m1-cD_3f72-a2-m1-cC
31 1r23-a1-m1-cB 97 54 0.1474 0.1443 0.2593 0.42 1r23-a1-m1-cB_1r23-a1-m1-cA
32 1r23-a1-m1-cA 104 54 0.1474 0.1346 0.2593 0.44 1r23-a1-m1-cB_1r23-a1-m1-cA
33 5hso-a1-m1-cD 122 42 0.1579 0.1230 0.3571 0.83 5hso-a1-m1-cD_5hso-a1-m1-cC
34 5hso-a1-m1-cC 125 42 0.1579 0.1200 0.3571 0.90 5hso-a1-m1-cD_5hso-a1-m1-cC
35 3ns2-a2-m2-cC 181 72 0.2105 0.1105 0.2778 1.0 3ns2-a2-m1-cC_3ns2-a2-m2-cC
36 3ns2-a2-m1-cC 181 72 0.2105 0.1105 0.2778 1.0 3ns2-a2-m1-cC_3ns2-a2-m2-cC
37 5hsm-a1-m2-cA 131 42 0.1579 0.1145 0.3571 1.0 5hsm-a1-m1-cA_5hsm-a1-m2-cA
38 5hsm-a1-m1-cA 131 42 0.1579 0.1145 0.3571 1.0 5hsm-a1-m1-cA_5hsm-a1-m2-cA
39 3f72-a2-m1-cD 100 74 0.1895 0.1800 0.2432 1.0 3f72-a2-m1-cD_3f72-a2-m1-cC
40 2q0o-a1-m1-cB 235 49 0.1474 0.0596 0.2857 1.4 2q0o-a1-m1-cA_2q0o-a1-m1-cB
41 2q0o-a1-m1-cA 235 49 0.1474 0.0596 0.2857 1.4 2q0o-a1-m1-cA_2q0o-a1-m1-cB
42 1lj9-a1-m1-cB 142 72 0.1895 0.1268 0.2500 1.6 1lj9-a1-m1-cB_1lj9-a1-m1-cA
43 1lj9-a1-m1-cA 144 72 0.1895 0.1250 0.2500 1.9 1lj9-a1-m1-cB_1lj9-a1-m1-cA
44 8opz-a1-m3-cA 632 50 0.1895 0.0285 0.3600 2.1 8opz-a1-m2-cA_8opz-a1-m3-cA
45 8opz-a1-m2-cA 632 50 0.1895 0.0285 0.3600 2.1 8opz-a1-m2-cA_8opz-a1-m3-cA
46 3i8b-a2-m2-cA 499 35 0.1474 0.0281 0.4000 3.0 3i8b-a2-m1-cA_3i8b-a2-m2-cA
47 3i8b-a2-m1-cA 499 35 0.1474 0.0281 0.4000 3.0 3i8b-a2-m1-cA_3i8b-a2-m2-cA
48 3rqb-a1-m1-cA 255 53 0.1789 0.0667 0.3208 3.5 3rqb-a1-m1-cA_3rqb-a1-m1-cB
49 2znz-a6-m1-cH 146 26 0.0947 0.0616 0.3462 3.6 2znz-a6-m1-cG_2znz-a6-m1-cH
50 2znz-a6-m1-cG 146 26 0.0947 0.0616 0.3462 3.6 2znz-a6-m1-cG_2znz-a6-m1-cH
51 2znz-a2-m3-cH 146 26 0.0947 0.0616 0.3462 3.6 2znz-a2-m1-cF_2znz-a2-m3-cH, 2znz-a2-m1-cG_2znz-a2-m3-cH
52 2znz-a2-m1-cG 146 26 0.0947 0.0616 0.3462 3.6 2znz-a2-m1-cG_2znz-a2-m3-cH
53 2znz-a2-m1-cF 146 26 0.0947 0.0616 0.3462 3.6 2znz-a2-m1-cF_2znz-a2-m3-cH
54 3rqb-a1-m1-cB 256 53 0.1789 0.0664 0.3208 3.6 3rqb-a1-m1-cA_3rqb-a1-m1-cB
55 2oqg-a1-m1-cD 105 82 0.2421 0.2190 0.2805 3.6 2oqg-a1-m1-cC_2oqg-a1-m1-cD, 2oqg-a1-m1-cD_2oqg-a1-m1-cA, 2oqg-a1-m1-cD_2oqg-a1-m1-cB
56 2oqg-a1-m1-cC 105 82 0.2421 0.2190 0.2805 3.6 2oqg-a1-m1-cC_2oqg-a1-m1-cD
57 2oqg-a1-m1-cB 107 82 0.2421 0.2150 0.2805 3.7 2oqg-a1-m1-cA_2oqg-a1-m1-cB, 2oqg-a1-m1-cD_2oqg-a1-m1-cB
58 2oqg-a1-m1-cA 107 82 0.2421 0.2150 0.2805 4.0 2oqg-a1-m1-cA_2oqg-a1-m1-cB, 2oqg-a1-m1-cD_2oqg-a1-m1-cA
59 4fht-a1-m1-cA 141 47 0.1474 0.0993 0.2979 4.2 4fht-a1-m1-cA_4fht-a1-m1-cB
60 4fht-a1-m1-cB 142 47 0.1474 0.0986 0.2979 4.3 4fht-a1-m1-cA_4fht-a1-m1-cB
61 4g9y-a1-m2-cA 136 47 0.1474 0.1029 0.2979 4.4 4g9y-a1-m1-cA_4g9y-a1-m2-cA
62 4g9y-a1-m1-cA 136 47 0.1474 0.1029 0.2979 4.4 4g9y-a1-m1-cA_4g9y-a1-m2-cA
63 4ksa-a1-m1-cD 409 63 0.2000 0.0465 0.3016 4.6 4ksa-a1-m1-cD_4ksa-a1-m1-cA, 4ksa-a1-m1-cD_4ksa-a1-m1-cC
64 4ksa-a1-m1-cA 433 63 0.2000 0.0439 0.3016 4.8 4ksa-a1-m1-cD_4ksa-a1-m1-cA
65 4ksa-a1-m1-cC 432 63 0.2000 0.0440 0.3016 5.1 4ksa-a1-m1-cD_4ksa-a1-m1-cC
66 3g7k-a3-m1-cC 224 27 0.1053 0.0446 0.3704 6.3 3g7k-a3-m1-cC_3g7k-a3-m1-cD
67 3g7k-a3-m1-cD 379 29 0.1158 0.0290 0.3793 9.6 3g7k-a3-m1-cC_3g7k-a3-m1-cD
68 3g7k-a2-m1-cA 379 29 0.1158 0.0290 0.3793 9.6 3g7k-a2-m1-cA_3g7k-a2-m1-cB
69 3g7k-a1-m1-cD 379 29 0.1158 0.0290 0.3793 9.6 3g7k-a1-m1-cA_3g7k-a1-m1-cD
70 3g7k-a1-m1-cA 379 29 0.1158 0.0290 0.3793 9.6 3g7k-a1-m1-cA_3g7k-a1-m1-cD
71 3g7k-a2-m1-cB 387 29 0.1158 0.0284 0.3793 9.6 3g7k-a2-m1-cA_3g7k-a2-m1-cB
72 7kip-a1-m1-cC 1192 70 0.2316 0.0185 0.3143 9.9 7kip-a1-m1-cB_7kip-a1-m1-cC
73 7kip-a1-m1-cB 1192 70 0.2316 0.0185 0.3143 9.9 7kip-a1-m1-cB_7kip-a1-m1-cC

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Reference:
Jacob Schwartz et al.

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