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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=68)
ELNISPDEIVSIREQFNMSRGVFARLLHTSSRTLENWEQGRSVPNGQAVTLLKLVQRHPE
TLSHIAEL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 8a0w-a1-m1-cB 68 68 1.0000 1.0000 1.0000 2.91e-45 8a0w-a1-m1-cA_8a0w-a1-m1-cB
2 8a0w-a1-m1-cA 68 68 1.0000 1.0000 1.0000 2.91e-45 8a0w-a1-m1-cA_8a0w-a1-m1-cB
3 5j9i-a4-m1-cH 68 68 1.0000 1.0000 1.0000 2.91e-45 5j9i-a4-m1-cG_5j9i-a4-m1-cH
4 5j9i-a4-m1-cG 65 65 0.9559 1.0000 1.0000 4.53e-43 5j9i-a4-m1-cG_5j9i-a4-m1-cH
5 2ppx-a1-m4-cA 61 52 0.2794 0.3115 0.3654 3.69e-05 2ppx-a1-m2-cA_2ppx-a1-m4-cA, 2ppx-a1-m3-cA_2ppx-a1-m4-cA
6 2ppx-a1-m3-cA 61 52 0.2794 0.3115 0.3654 3.69e-05 2ppx-a1-m3-cA_2ppx-a1-m4-cA
7 2ppx-a1-m2-cA 61 52 0.2794 0.3115 0.3654 3.69e-05 2ppx-a1-m2-cA_2ppx-a1-m4-cA
8 3o9x-a1-m1-cB 132 62 0.2059 0.1061 0.2258 6.99e-05 3o9x-a1-m1-cA_3o9x-a1-m1-cB
9 3o9x-a1-m1-cA 132 62 0.2059 0.1061 0.2258 6.99e-05 3o9x-a1-m1-cA_3o9x-a1-m1-cB
10 3gn5-a1-m1-cA 132 62 0.2059 0.1061 0.2258 6.99e-05 3gn5-a1-m1-cB_3gn5-a1-m1-cA
11 2i5k-a1-m4-cA 465 43 0.2059 0.0301 0.3256 0.21 2i5k-a1-m4-cA_2i5k-a1-m4-cB
12 2i5k-a1-m3-cA 465 43 0.2059 0.0301 0.3256 0.21 2i5k-a1-m3-cA_2i5k-a1-m4-cB
13 2i5k-a1-m4-cB 466 43 0.2059 0.0300 0.3256 0.21 2i5k-a1-m2-cB_2i5k-a1-m4-cB, 2i5k-a1-m3-cA_2i5k-a1-m4-cB, 2i5k-a1-m4-cA_2i5k-a1-m4-cB
14 2i5k-a1-m2-cB 466 43 0.2059 0.0300 0.3256 0.21 2i5k-a1-m2-cB_2i5k-a1-m4-cB
15 2r1j-a1-m1-cR 66 57 0.1912 0.1970 0.2281 0.40 2r1j-a1-m1-cL_2r1j-a1-m1-cR
16 2r1j-a1-m1-cL 66 57 0.1912 0.1970 0.2281 0.40 2r1j-a1-m1-cL_2r1j-a1-m1-cR
17 5my2-a2-m1-cD 852 54 0.2206 0.0176 0.2778 1.1 5my2-a2-m1-cC_5my2-a2-m1-cD
18 5my2-a2-m1-cC 848 54 0.2206 0.0177 0.2778 1.1 5my2-a2-m1-cC_5my2-a2-m1-cD
19 2xcj-a1-m1-cB 84 42 0.2206 0.1786 0.3571 1.8 2xcj-a1-m1-cA_2xcj-a1-m1-cB
20 2xcj-a1-m1-cA 84 42 0.2206 0.1786 0.3571 1.8 2xcj-a1-m1-cA_2xcj-a1-m1-cB
21 2vz8-a1-m1-cB 2004 54 0.2206 0.0075 0.2778 5.3 2vz8-a1-m1-cA_2vz8-a1-m1-cB
22 2vz8-a1-m1-cA 1962 54 0.2206 0.0076 0.2778 5.8 2vz8-a1-m1-cA_2vz8-a1-m1-cB
23 2vun-a1-m1-cD 385 26 0.1324 0.0234 0.3462 7.8 2vun-a1-m1-cB_2vun-a1-m1-cD, 2vun-a1-m1-cC_2vun-a1-m1-cD
24 2vun-a1-m1-cC 385 26 0.1324 0.0234 0.3462 7.8 2vun-a1-m1-cC_2vun-a1-m1-cD
25 2vun-a1-m1-cB 385 26 0.1324 0.0234 0.3462 7.8 2vun-a1-m1-cB_2vun-a1-m1-cD

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Reference:
Jacob Schwartz et al.

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