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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=99)
ELPDFFEGKHFFLYGEFPGDERRRLIRYVTAFNGELEDYMNERVQFVITAQEWDPNFEEA
LMENPSLAFVRPRWIYSCNEKQKLLPHQLYGVVPQAHHH

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3pc6-a1-m1-cA 99 99 1.0000 1.0000 1.0000 1.08e-71 3pc6-a1-m1-cA_3pc6-a1-m1-cB
2 3pc6-a1-m1-cB 103 99 1.0000 0.9612 1.0000 1.81e-71 3pc6-a1-m1-cA_3pc6-a1-m1-cB
3 3qvg-a1-m1-cD 104 96 0.9596 0.9135 0.9896 2.77e-67 3qvg-a1-m1-cB_3qvg-a1-m1-cD
4 3qvg-a1-m1-cB 104 96 0.9596 0.9135 0.9896 2.77e-67 3qvg-a1-m1-cB_3qvg-a1-m1-cD
5 3pc7-a2-m2-cB 76 84 0.2424 0.3158 0.2857 4.03e-05 3pc7-a2-m1-cB_3pc7-a2-m2-cB
6 3pc7-a2-m1-cB 76 84 0.2424 0.3158 0.2857 4.03e-05 3pc7-a2-m1-cB_3pc7-a2-m2-cB
7 2rhs-a1-m1-cD 785 48 0.1212 0.0153 0.2500 2.8 2rhs-a1-m1-cD_2rhs-a1-m1-cB
8 2rhs-a1-m1-cB 786 48 0.1212 0.0153 0.2500 2.9 2rhs-a1-m1-cD_2rhs-a1-m1-cB
9 7pxq-a1-m2-cA 821 40 0.1212 0.0146 0.3000 3.7 7pxq-a1-m1-cA_7pxq-a1-m2-cA
10 7pxq-a1-m1-cA 821 40 0.1212 0.0146 0.3000 3.7 7pxq-a1-m1-cA_7pxq-a1-m2-cA
11 7lht-a1-m1-cB 1795 61 0.1717 0.0095 0.2787 3.8 7lht-a1-m1-cA_7lht-a1-m1-cB
12 7lht-a1-m1-cA 1795 61 0.1717 0.0095 0.2787 3.8 7lht-a1-m1-cA_7lht-a1-m1-cB
13 6xr4-a1-m1-cB 1040 61 0.1717 0.0163 0.2787 4.2 6xr4-a1-m1-cA_6xr4-a1-m1-cB
14 6xr4-a1-m1-cA 1040 61 0.1717 0.0163 0.2787 4.2 6xr4-a1-m1-cA_6xr4-a1-m1-cB
15 4c91-a1-m1-cA 811 48 0.1313 0.0160 0.2708 4.5 4c91-a1-m1-cB_4c91-a1-m1-cA
16 4c91-a1-m1-cB 809 48 0.1313 0.0161 0.2708 4.5 4c91-a1-m1-cB_4c91-a1-m1-cA
17 8aep-a1-m1-cB 396 41 0.1010 0.0253 0.2439 8.5 8aep-a1-m1-cA_8aep-a1-m1-cB
18 8aep-a1-m1-cA 396 41 0.1010 0.0253 0.2439 8.5 8aep-a1-m1-cA_8aep-a1-m1-cB
19 3slg-a4-m1-cD 334 41 0.1313 0.0389 0.3171 9.1 3slg-a4-m1-cD_3slg-a4-m1-cE
20 3slg-a4-m1-cE 334 67 0.1616 0.0479 0.2388 9.4 3slg-a4-m1-cD_3slg-a4-m1-cE
21 3slg-a1-m1-cA 334 67 0.1616 0.0479 0.2388 9.4 3slg-a1-m1-cA_3slg-a1-m1-cC
22 3slg-a1-m1-cC 335 41 0.1313 0.0388 0.3171 9.4 3slg-a1-m1-cA_3slg-a1-m1-cC

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Reference:
Jacob Schwartz et al.

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