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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=85)
ELTAKKRAALNRLKTVRGHLDGIVRMLESDAYCVDVMKQISAVQSSLERANRVMLHNHLE
TCFSTAVLDGHGQAAIEELIDAVKF

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2hh7-a2-m4-cA 85 85 1.0000 1.0000 1.0000 8.36e-59 2hh7-a2-m1-cA_2hh7-a2-m4-cA, 2hh7-a2-m3-cA_2hh7-a2-m4-cA
2 2hh7-a2-m3-cA 85 85 1.0000 1.0000 1.0000 8.36e-59 2hh7-a2-m3-cA_2hh7-a2-m4-cA
3 2hh7-a2-m1-cA 85 85 1.0000 1.0000 1.0000 8.36e-59 2hh7-a2-m1-cA_2hh7-a2-m4-cA
4 4m1p-a2-m9-cA 96 75 0.3059 0.2708 0.3467 6.17e-16 4m1p-a2-m12-cA_4m1p-a2-m9-cA
5 4m1p-a2-m12-cA 96 75 0.3059 0.2708 0.3467 6.17e-16 4m1p-a2-m12-cA_4m1p-a2-m9-cA
6 4m1p-a1-m4-cA 96 75 0.3059 0.2708 0.3467 6.17e-16 4m1p-a1-m3-cA_4m1p-a1-m4-cA
7 4m1p-a1-m3-cA 96 75 0.3059 0.2708 0.3467 6.17e-16 4m1p-a1-m3-cA_4m1p-a1-m4-cA
8 5fmn-a1-m2-cA 86 74 0.2706 0.2674 0.3108 1.84e-11 5fmn-a1-m2-cA_5fmn-a1-m2-cB
9 5fmn-a1-m1-cA 86 74 0.2706 0.2674 0.3108 1.84e-11 5fmn-a1-m1-cA_5fmn-a1-m2-cB
10 5fmn-a1-m2-cB 89 74 0.2706 0.2584 0.3108 2.89e-11 5fmn-a1-m1-cA_5fmn-a1-m2-cB, 5fmn-a1-m2-cA_5fmn-a1-m2-cB
11 4adz-a1-m2-cB 90 76 0.3059 0.2889 0.3421 4.62e-11 4adz-a1-m2-cA_4adz-a1-m2-cB
12 4adz-a1-m2-cA 90 76 0.3059 0.2889 0.3421 4.62e-11 4adz-a1-m2-cA_4adz-a1-m2-cB
13 4uig-a1-m4-cA 91 76 0.3059 0.2857 0.3421 6.00e-11 4uig-a1-m3-cA_4uig-a1-m4-cA
14 4uig-a1-m3-cA 91 76 0.3059 0.2857 0.3421 6.00e-11 4uig-a1-m3-cA_4uig-a1-m4-cA
15 6ahx-a1-m2-cA 60 58 0.2118 0.3000 0.3103 1.94e-07 6ahx-a1-m1-cA_6ahx-a1-m2-cA
16 6ahx-a1-m1-cA 60 58 0.2118 0.3000 0.3103 1.94e-07 6ahx-a1-m1-cA_6ahx-a1-m2-cA
17 5lbm-a1-m1-cD 89 61 0.2471 0.2360 0.3443 6.09e-06 5lbm-a1-m1-cA_5lbm-a1-m1-cD, 5lbm-a1-m1-cB_5lbm-a1-m1-cD, 5lbm-a1-m1-cC_5lbm-a1-m1-cD
18 5lbm-a1-m1-cC 89 61 0.2471 0.2360 0.3443 6.09e-06 5lbm-a1-m1-cC_5lbm-a1-m1-cD
19 5lbm-a1-m1-cB 82 56 0.2353 0.2439 0.3571 4.27e-05 5lbm-a1-m1-cA_5lbm-a1-m1-cB, 5lbm-a1-m1-cB_5lbm-a1-m1-cD
20 5lbm-a1-m1-cA 82 56 0.2353 0.2439 0.3571 4.27e-05 5lbm-a1-m1-cA_5lbm-a1-m1-cB, 5lbm-a1-m1-cA_5lbm-a1-m1-cD
21 5lcy-a1-m1-cD 88 41 0.1647 0.1591 0.3415 7.28e-04 5lcy-a1-m1-cA_5lcy-a1-m1-cD, 5lcy-a1-m1-cC_5lcy-a1-m1-cD
22 5lcy-a1-m1-cC 88 41 0.1647 0.1591 0.3415 7.28e-04 5lcy-a1-m1-cC_5lcy-a1-m1-cD
23 5lcy-a1-m1-cA 88 41 0.1647 0.1591 0.3415 7.28e-04 5lcy-a1-m1-cA_5lcy-a1-m1-cD

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Reference:
Jacob Schwartz et al.

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