Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=85)
EMRELRRQVDQLTNDKARVEVERDNLAEDIMRLREKLQEEMLQREEAENTLQSFRQDVDN
ASLARLDLERKVESLQEEIAFLKKL

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Dimers
1 5whf-a1-m2-cG 88 85 1.0000 0.9659 1.0000 1.10e-52 5whf-a1-m2-cD_5whf-a1-m2-cG, 5whf-a1-m2-cH_5whf-a1-m2-cG
2 5whf-a1-m2-cD 85 85 1.0000 1.0000 1.0000 1.20e-52 5whf-a1-m2-cD_5whf-a1-m2-cG
3 5whf-a1-m2-cE 86 85 1.0000 0.9884 1.0000 1.34e-52 5whf-a1-m2-cH_5whf-a1-m2-cE
4 5whf-a1-m2-cH 84 84 0.9882 1.0000 1.0000 4.91e-52 5whf-a1-m2-cH_5whf-a1-m2-cE, 5whf-a1-m2-cH_5whf-a1-m2-cG
5 4ypc-a1-m3-cA 83 77 0.9059 0.9277 1.0000 2.53e-47 4ypc-a1-m2-cA_4ypc-a1-m3-cA
6 4ypc-a1-m2-cA 83 77 0.9059 0.9277 1.0000 2.53e-47 4ypc-a1-m2-cA_4ypc-a1-m3-cA
7 3uf1-a2-m1-cD 108 85 0.9647 0.7593 0.9647 2.73e-46 3uf1-a2-m1-cC_3uf1-a2-m1-cD
8 3uf1-a2-m1-cC 105 85 0.9647 0.7810 0.9647 4.03e-46 3uf1-a2-m1-cC_3uf1-a2-m1-cD
9 4yv3-a1-m1-cA 75 76 0.8706 0.9867 0.9737 4.75e-41 4yv3-a1-m1-cC_4yv3-a1-m1-cA
10 4yv3-a1-m1-cC 61 62 0.7059 0.9836 0.9677 7.01e-31 4yv3-a1-m1-cC_4yv3-a1-m1-cA
11 6a9p-a1-m1-cH 101 85 0.6235 0.5248 0.6235 5.68e-29 6a9p-a1-m1-cH_6a9p-a1-m1-cA
12 6a9p-a2-m1-cF 100 85 0.6235 0.5300 0.6235 6.03e-29 6a9p-a2-m1-cF_6a9p-a2-m1-cE
13 6a9p-a2-m1-cE 102 85 0.6235 0.5196 0.6235 7.04e-29 6a9p-a2-m1-cE_6a9p-a2-m1-cC, 6a9p-a2-m1-cF_6a9p-a2-m1-cE
14 6a9p-a2-m1-cC 104 85 0.6235 0.5096 0.6235 7.05e-29 6a9p-a2-m1-cE_6a9p-a2-m1-cC
15 6a9p-a1-m1-cA 103 85 0.6235 0.5146 0.6235 7.32e-29 6a9p-a1-m1-cH_6a9p-a1-m1-cA
16 3s4r-a1-m1-cA 88 37 0.4353 0.4205 1.0000 4.05e-18 3s4r-a1-m1-cA_3s4r-a1-m1-cB
17 3s4r-a1-m1-cB 91 37 0.4353 0.4066 1.0000 4.33e-18 3s4r-a1-m1-cA_3s4r-a1-m1-cB
18 6e2j-a2-m4-cA 107 84 0.3765 0.2991 0.3810 6.74e-14 6e2j-a2-m1-cA_6e2j-a2-m4-cA, 6e2j-a2-m2-cA_6e2j-a2-m4-cA, 6e2j-a2-m3-cA_6e2j-a2-m4-cA
19 6e2j-a2-m3-cA 107 84 0.3765 0.2991 0.3810 6.74e-14 6e2j-a2-m3-cA_6e2j-a2-m4-cA
20 6e2j-a2-m2-cA 107 84 0.3765 0.2991 0.3810 6.74e-14 6e2j-a2-m2-cA_6e2j-a2-m4-cA
21 6e2j-a2-m1-cA 107 84 0.3765 0.2991 0.3810 6.74e-14 6e2j-a2-m1-cA_6e2j-a2-m4-cA
22 6e2j-a2-m4-cB 104 83 0.3765 0.3077 0.3855 6.02e-09 6e2j-a2-m2-cB_6e2j-a2-m4-cB
23 6e2j-a2-m4-cB 104 41 0.1765 0.1442 0.3659 0.95 6e2j-a2-m2-cB_6e2j-a2-m4-cB
24 6e2j-a2-m2-cB 104 83 0.3765 0.3077 0.3855 6.02e-09 6e2j-a2-m2-cB_6e2j-a2-m4-cB
25 6e2j-a2-m2-cB 104 41 0.1765 0.1442 0.3659 0.95 6e2j-a2-m2-cB_6e2j-a2-m4-cB
26 1n9w-a1-m1-cA 356 59 0.2706 0.0646 0.3898 1.9 1n9w-a1-m1-cA_1n9w-a1-m1-cB
27 1n9w-a1-m1-cB 359 59 0.2706 0.0641 0.3898 1.9 1n9w-a1-m1-cA_1n9w-a1-m1-cB
28 4qqw-a5-m1-cC 902 48 0.1882 0.0177 0.3333 2.0 4qqw-a5-m1-cC_4qqw-a5-m1-cA
29 4qqw-a5-m1-cA 911 48 0.1882 0.0176 0.3333 2.0 4qqw-a5-m1-cC_4qqw-a5-m1-cA
30 2d8d-a1-m1-cA 80 75 0.2706 0.2875 0.3067 3.6 2d8d-a1-m1-cA_2d8d-a1-m1-cB
31 4ihs-a3-m1-cA 89 29 0.1176 0.1124 0.3448 3.8 4ihs-a3-m1-cA_4ihs-a3-m1-cC
32 4ihs-a3-m1-cC 90 29 0.1176 0.1111 0.3448 3.9 4ihs-a3-m1-cA_4ihs-a3-m1-cC
33 2d8d-a1-m1-cB 83 75 0.2706 0.2771 0.3067 4.7 2d8d-a1-m1-cA_2d8d-a1-m1-cB
34 6mi3-a1-m1-cB 124 44 0.2353 0.1613 0.4545 5.1 6mi3-a1-m1-cA_6mi3-a1-m1-cB
35 6mi3-a1-m1-cA 122 44 0.2353 0.1639 0.4545 5.6 6mi3-a1-m1-cA_6mi3-a1-m1-cB
36 4kvs-a2-m2-cA 221 27 0.1059 0.0407 0.3333 6.3 4kvs-a2-m1-cA_4kvs-a2-m2-cA
37 4kvs-a2-m1-cA 221 27 0.1059 0.0407 0.3333 6.3 4kvs-a2-m1-cA_4kvs-a2-m2-cA
38 3k1m-a4-m1-cA 300 29 0.1176 0.0333 0.3448 7.2 3k1m-a4-m1-cA_3k1m-a4-m3-cB
39 3k1m-a2-m2-cA 300 29 0.1176 0.0333 0.3448 7.2 3k1m-a2-m1-cA_3k1m-a2-m2-cA
40 3k1m-a2-m1-cA 300 29 0.1176 0.0333 0.3448 7.2 3k1m-a2-m1-cA_3k1m-a2-m2-cA, 3k1m-a2-m1-cA_3k1m-a2-m4-cB
41 3k1m-a1-m1-cA 300 29 0.1176 0.0333 0.3448 7.2 3k1m-a1-m1-cA_3k1m-a1-m1-cB
42 7eyw-a2-m3-cD 252 58 0.1647 0.0556 0.2414 8.9 7eyw-a2-m3-cD_7eyw-a2-m1-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600