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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=85)
EMRLEKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQDEHGFISREFHGKYRIPA
DVDPLTITSSMSSDGVLTVNGPRKQ

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2y1z-a1-m1-cA 85 85 1.0000 1.0000 1.0000 1.73e-58 2y1z-a1-m1-cA_2y1z-a1-m1-cB
2 6bp9-a1-m1-cB 89 85 0.9882 0.9438 0.9882 7.69e-58 6bp9-a1-m1-cA_6bp9-a1-m1-cB
3 6bp9-a1-m1-cA 89 85 0.9882 0.9438 0.9882 7.69e-58 6bp9-a1-m1-cA_6bp9-a1-m1-cB
4 2y1z-a1-m1-cB 87 84 0.9882 0.9655 1.0000 1.34e-57 2y1z-a1-m1-cA_2y1z-a1-m1-cB
5 3l1g-a1-m2-cA 95 84 0.9647 0.8632 0.9762 7.07e-56 3l1g-a1-m1-cA_3l1g-a1-m2-cA
6 3l1g-a1-m1-cA 95 84 0.9647 0.8632 0.9762 7.07e-56 3l1g-a1-m1-cA_3l1g-a1-m2-cA
7 2n0k-a1-m1-cB 89 85 0.9647 0.9213 0.9647 8.09e-56 2n0k-a1-m1-cA_2n0k-a1-m1-cB
8 2n0k-a1-m1-cA 89 85 0.9647 0.9213 0.9647 8.09e-56 2n0k-a1-m1-cA_2n0k-a1-m1-cB
9 3j07-a1-m1-cX 175 85 0.9765 0.4743 0.9765 1.11e-55 3j07-a1-m1-cG_3j07-a1-m1-cX, 3j07-a1-m1-cS_3j07-a1-m1-cX, 3j07-a1-m1-cW_3j07-a1-m1-cX
10 3j07-a1-m1-cW 175 85 0.9765 0.4743 0.9765 1.11e-55 3j07-a1-m1-cI_3j07-a1-m1-cW, 3j07-a1-m1-cW_3j07-a1-m1-cX
11 3j07-a1-m1-cS 175 85 0.9765 0.4743 0.9765 1.11e-55 3j07-a1-m1-cS_3j07-a1-m1-cX
12 3j07-a1-m1-cI 175 85 0.9765 0.4743 0.9765 1.11e-55 3j07-a1-m1-cI_3j07-a1-m1-cW
13 3j07-a1-m1-cG 175 85 0.9765 0.4743 0.9765 1.11e-55 3j07-a1-m1-cG_3j07-a1-m1-cX
14 2ygd-a1-m1-cX 175 85 0.9765 0.4743 0.9765 1.11e-55 2ygd-a1-m1-cU_2ygd-a1-m1-cX, 2ygd-a1-m1-cW_2ygd-a1-m1-cX
15 2ygd-a1-m1-cW 175 85 0.9765 0.4743 0.9765 1.11e-55 2ygd-a1-m1-cC_2ygd-a1-m1-cW, 2ygd-a1-m1-cW_2ygd-a1-m1-cX
16 2ygd-a1-m1-cV 175 85 0.9765 0.4743 0.9765 1.11e-55 2ygd-a1-m1-cF_2ygd-a1-m1-cV
17 2ygd-a1-m1-cU 175 85 0.9765 0.4743 0.9765 1.11e-55 2ygd-a1-m1-cF_2ygd-a1-m1-cU, 2ygd-a1-m1-cU_2ygd-a1-m1-cX
18 2ygd-a1-m1-cF 175 85 0.9765 0.4743 0.9765 1.11e-55 2ygd-a1-m1-cF_2ygd-a1-m1-cU, 2ygd-a1-m1-cF_2ygd-a1-m1-cV
19 2ygd-a1-m1-cC 175 85 0.9765 0.4743 0.9765 1.11e-55 2ygd-a1-m1-cC_2ygd-a1-m1-cW
20 4m5t-a3-m1-cG 86 84 0.9529 0.9419 0.9643 6.29e-55 4m5t-a3-m1-cC_4m5t-a3-m1-cG
21 4m5t-a3-m1-cE 85 84 0.9529 0.9529 0.9643 7.04e-55 4m5t-a3-m1-cC_4m5t-a3-m1-cE
22 4m5t-a3-m1-cC 85 84 0.9412 0.9412 0.9524 2.79e-52 4m5t-a3-m1-cA_4m5t-a3-m1-cC, 4m5t-a3-m1-cC_4m5t-a3-m1-cE, 4m5t-a3-m1-cC_4m5t-a3-m1-cG
23 4m5t-a3-m1-cA 82 84 0.9059 0.9390 0.9167 2.52e-49 4m5t-a3-m1-cA_4m5t-a3-m1-cC
24 2y1y-a1-m2-cA 77 78 0.8941 0.9870 0.9744 5.43e-49 2y1y-a1-m1-cA_2y1y-a1-m2-cA
25 2y1y-a1-m1-cA 77 78 0.8941 0.9870 0.9744 5.43e-49 2y1y-a1-m1-cA_2y1y-a1-m2-cA
26 3n3e-a1-m1-cB 104 83 0.5647 0.4615 0.5783 9.93e-34 3n3e-a1-m1-cB_3n3e-a1-m1-cA
27 3n3e-a1-m1-cA 106 83 0.5647 0.4528 0.5783 1.14e-33 3n3e-a1-m1-cB_3n3e-a1-m1-cA
28 6dv5-a1-m1-cK 175 83 0.5294 0.2571 0.5422 1.62e-27 6dv5-a1-m1-cJ_6dv5-a1-m1-cK
29 6dv5-a1-m1-cJ 162 79 0.5176 0.2716 0.5570 1.68e-27 6dv5-a1-m1-cJ_6dv5-a1-m1-cK
30 6dv5-a1-m1-cF 163 80 0.5176 0.2699 0.5500 4.53e-27 6dv5-a1-m1-cF_6dv5-a1-m1-cU
31 6dv5-a1-m1-cX 166 80 0.5176 0.2651 0.5500 5.00e-27 6dv5-a1-m1-cP_6dv5-a1-m1-cX
32 6dv5-a1-m1-cU 175 80 0.5176 0.2514 0.5500 5.16e-27 6dv5-a1-m1-cF_6dv5-a1-m1-cU
33 6dv5-a1-m1-cP 164 75 0.5059 0.2622 0.5733 1.73e-26 6dv5-a1-m1-cP_6dv5-a1-m1-cX
34 6f2r-a1-m1-cC 121 83 0.4353 0.3058 0.4458 7.10e-25 6f2r-a1-m1-cD_6f2r-a1-m1-cC
35 6f2r-a1-m1-cD 80 76 0.4000 0.4250 0.4474 4.43e-23 6f2r-a1-m1-cD_6f2r-a1-m1-cC
36 2bol-a1-m1-cB 290 66 0.2353 0.0690 0.3030 0.003 2bol-a1-m1-cB_2bol-a1-m1-cA
37 2bol-a1-m1-cB 290 74 0.2235 0.0655 0.2568 1.3 2bol-a1-m1-cB_2bol-a1-m1-cA
38 2bol-a1-m1-cA 301 66 0.2353 0.0664 0.3030 0.11 2bol-a1-m1-cB_2bol-a1-m1-cA
39 2bol-a1-m1-cA 301 74 0.2118 0.0598 0.2432 1.2 2bol-a1-m1-cB_2bol-a1-m1-cA
40 3sgr-a3-m3-cF 25 20 0.1529 0.5200 0.6500 1.5 3sgr-a3-m1-cC_3sgr-a3-m3-cF, 3sgr-a3-m3-cB_3sgr-a3-m3-cF, 3sgr-a3-m3-cE_3sgr-a3-m3-cF
41 3sgr-a3-m3-cE 25 20 0.1529 0.5200 0.6500 1.5 3sgr-a3-m3-cB_3sgr-a3-m3-cE, 3sgr-a3-m3-cE_3sgr-a3-m3-cF
42 3sgr-a3-m3-cB 25 20 0.1529 0.5200 0.6500 1.5 3sgr-a3-m1-cD_3sgr-a3-m3-cB, 3sgr-a3-m3-cB_3sgr-a3-m3-cE, 3sgr-a3-m3-cB_3sgr-a3-m3-cF
43 3sgr-a3-m1-cD 25 20 0.1529 0.5200 0.6500 1.5 3sgr-a3-m1-cD_3sgr-a3-m3-cB
44 3sgr-a2-m1-cE 25 20 0.1529 0.5200 0.6500 1.5 3sgr-a2-m1-cA_3sgr-a2-m1-cE
45 3sgr-a2-m1-cB 25 20 0.1529 0.5200 0.6500 1.5 3sgr-a2-m1-cA_3sgr-a2-m1-cB
46 3sgr-a2-m1-cA 25 20 0.1529 0.5200 0.6500 1.5 3sgr-a2-m1-cA_3sgr-a2-m1-cB, 3sgr-a2-m1-cA_3sgr-a2-m1-cE
47 3sgr-a3-m1-cC 24 20 0.1529 0.5417 0.6500 1.5 3sgr-a3-m1-cC_3sgr-a3-m3-cF
48 4c65-a2-m3-cH 429 51 0.2118 0.0420 0.3529 2.3 4c65-a2-m3-cH_4c65-a2-m1-cE, 4c65-a2-m3-cH_4c65-a2-m3-cG
49 4c65-a1-m2-cC 433 51 0.2118 0.0416 0.3529 2.3 4c65-a1-m2-cC_4c65-a1-m2-cA
50 4c65-a2-m3-cG 431 51 0.2118 0.0418 0.3529 2.4 4c65-a2-m3-cH_4c65-a2-m3-cG
51 4c65-a2-m1-cE 435 51 0.2118 0.0414 0.3529 2.4 4c65-a2-m3-cH_4c65-a2-m1-cE
52 4c65-a1-m2-cA 436 51 0.2118 0.0413 0.3529 2.4 4c65-a1-m2-cC_4c65-a1-m2-cA
53 3msu-a1-m1-cA 415 27 0.0941 0.0193 0.2963 5.9 3msu-a1-m1-cA_3msu-a1-m1-cB
54 3msu-a1-m1-cB 426 27 0.0941 0.0188 0.2963 6.5 3msu-a1-m1-cA_3msu-a1-m1-cB
55 1pn0-a3-m2-cD 656 64 0.2000 0.0259 0.2656 8.3 1pn0-a3-m2-cB_1pn0-a3-m2-cD
56 1pn0-a3-m2-cB 652 64 0.2000 0.0261 0.2656 8.8 1pn0-a3-m1-cA_1pn0-a3-m2-cB, 1pn0-a3-m2-cB_1pn0-a3-m2-cD
57 1pn0-a3-m1-cA 652 64 0.2000 0.0261 0.2656 8.8 1pn0-a3-m1-cA_1pn0-a3-m2-cB
58 3cu7-a3-m1-cA 1625 81 0.2941 0.0154 0.3086 9.3 3cu7-a3-m1-cB_3cu7-a3-m1-cA

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Reference:
Jacob Schwartz et al.

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