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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=82)
ENCCVRPLYIDFRQDLGWKWVHEPKGYYANFCSGPCPYLRSASASPCCVPQDLEPLTILY
YVGRTPKVEQLSNMVVKSCKCS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1ktz-a1-m2-cA 82 82 1.0000 1.0000 1.0000 9.30e-58 1ktz-a1-m1-cA_1ktz-a1-m2-cA
2 1ktz-a1-m1-cA 82 82 1.0000 1.0000 1.0000 9.30e-58 1ktz-a1-m1-cA_1ktz-a1-m2-cA
3 3eo1-a2-m1-cL 112 100 1.0000 0.7321 0.8200 8.81e-54 3eo1-a2-m1-cI_3eo1-a2-m1-cL
4 3eo1-a2-m1-cI 112 100 1.0000 0.7321 0.8200 8.81e-54 3eo1-a2-m1-cI_3eo1-a2-m1-cL
5 4kxz-a1-m1-cB 112 100 0.8293 0.6071 0.6800 3.87e-46 4kxz-a1-m1-cA_4kxz-a1-m1-cB
6 4kxz-a1-m1-cA 112 100 0.8293 0.6071 0.6800 3.87e-46 4kxz-a1-m1-cA_4kxz-a1-m1-cB
7 5vqp-a1-m2-cA 322 83 0.8049 0.2050 0.7952 2.65e-44 5vqp-a1-m1-cA_5vqp-a1-m2-cA
8 5vqp-a1-m1-cA 322 83 0.8049 0.2050 0.7952 2.65e-44 5vqp-a1-m1-cA_5vqp-a1-m2-cA
9 3kfd-a3-m1-cD 112 100 0.8171 0.5982 0.6700 8.16e-44 3kfd-a3-m1-cC_3kfd-a3-m1-cD
10 3kfd-a3-m1-cC 112 100 0.8171 0.5982 0.6700 8.16e-44 3kfd-a3-m1-cA_3kfd-a3-m1-cC, 3kfd-a3-m1-cC_3kfd-a3-m1-cD
11 3kfd-a3-m1-cA 112 100 0.8171 0.5982 0.6700 8.16e-44 3kfd-a3-m1-cA_3kfd-a3-m1-cC
12 8c7h-a1-m1-cD 111 100 0.8171 0.6036 0.6700 1.06e-43 8c7h-a1-m1-cB_8c7h-a1-m1-cD
13 8c7h-a1-m1-cB 89 82 0.7683 0.7079 0.7683 1.29e-43 8c7h-a1-m1-cB_8c7h-a1-m1-cD
14 3rjr-a2-m1-cD 342 100 0.8171 0.1959 0.6700 1.44e-42 3rjr-a2-m1-cD_3rjr-a2-m1-cC
15 3rjr-a2-m1-cC 343 100 0.8171 0.1953 0.6700 1.61e-42 3rjr-a2-m1-cD_3rjr-a2-m1-cC
16 5hlz-a2-m1-cF 86 82 0.4146 0.3953 0.4146 3.08e-17 5hlz-a2-m1-cH_5hlz-a2-m1-cF
17 5ji1-a1-m1-cA 95 82 0.4146 0.3579 0.4146 4.33e-17 5ji1-a1-m1-cB_5ji1-a1-m1-cA
18 1nys-a1-m1-cB 85 82 0.4024 0.3882 0.4024 4.00e-16 1nys-a1-m1-cD_1nys-a1-m1-cB
19 5hlz-a2-m1-cH 84 82 0.4024 0.3929 0.4024 4.50e-16 5hlz-a2-m1-cH_5hlz-a2-m1-cF
20 5ji1-a1-m1-cB 92 81 0.4146 0.3696 0.4198 8.99e-16 5ji1-a1-m1-cB_5ji1-a1-m1-cA
21 4mid-a1-m2-cA 105 102 0.4390 0.3429 0.3529 5.69e-15 4mid-a1-m1-cA_4mid-a1-m2-cA
22 4mid-a1-m1-cA 105 102 0.4390 0.3429 0.3529 5.69e-15 4mid-a1-m1-cA_4mid-a1-m2-cA
23 5f3h-a2-m1-cL 104 96 0.4146 0.3269 0.3542 1.76e-14 5f3h-a2-m1-cL_5f3h-a2-m1-cK
24 5f3h-a2-m1-cK 105 96 0.4146 0.3238 0.3542 1.86e-14 5f3h-a2-m1-cL_5f3h-a2-m1-cK
25 5jhw-a1-m1-cB 109 96 0.4146 0.3119 0.3542 2.93e-14 5jhw-a1-m1-cA_5jhw-a1-m1-cB
26 5jhw-a1-m1-cA 109 96 0.4146 0.3119 0.3542 2.93e-14 5jhw-a1-m1-cA_5jhw-a1-m1-cB
27 5e4g-a1-m2-cA 108 96 0.4146 0.3148 0.3542 3.02e-14 5e4g-a1-m1-cA_5e4g-a1-m2-cA
28 5e4g-a1-m1-cA 108 96 0.4146 0.3148 0.3542 3.02e-14 5e4g-a1-m1-cA_5e4g-a1-m2-cA
29 1nys-a1-m1-cD 75 81 0.3902 0.4267 0.3951 7.25e-14 1nys-a1-m1-cD_1nys-a1-m1-cB
30 5uhm-a1-m1-cB 87 81 0.3780 0.3563 0.3827 2.00e-13 5uhm-a1-m1-cA_5uhm-a1-m1-cB
31 5uhm-a1-m1-cA 87 81 0.3780 0.3563 0.3827 2.00e-13 5uhm-a1-m1-cA_5uhm-a1-m1-cB
32 2qcw-a1-m1-cB 104 102 0.4024 0.3173 0.3235 7.93e-12 2qcw-a1-m1-cA_2qcw-a1-m1-cB
33 2qcw-a1-m1-cA 104 102 0.4024 0.3173 0.3235 7.93e-12 2qcw-a1-m1-cA_2qcw-a1-m1-cB
34 6umx-a1-m1-cA 279 81 0.3659 0.1075 0.3704 6.61e-11 6umx-a1-m1-cB_6umx-a1-m1-cA
35 6umx-a1-m1-cB 273 81 0.3537 0.1062 0.3580 6.85e-10 6umx-a1-m1-cB_6umx-a1-m1-cA
36 1bmp-a1-m2-cA 104 104 0.3780 0.2981 0.2981 9.16e-10 1bmp-a1-m1-cA_1bmp-a1-m2-cA
37 1bmp-a1-m1-cA 104 104 0.3780 0.2981 0.2981 9.16e-10 1bmp-a1-m1-cA_1bmp-a1-m2-cA
38 5nxs-a1-m1-cA 285 88 0.3902 0.1123 0.3636 1.64e-09 5nxs-a1-m1-cB_5nxs-a1-m1-cA
39 2qcq-a1-m1-cB 108 105 0.4024 0.3056 0.3143 7.46e-09 2qcq-a1-m1-cA_2qcq-a1-m1-cB
40 2qcq-a1-m1-cA 107 105 0.4024 0.3084 0.3143 7.89e-09 2qcq-a1-m1-cA_2qcq-a1-m1-cB
41 6oml-a1-m1-cY 105 104 0.3902 0.3048 0.3077 7.91e-09 6oml-a1-m1-cY_6oml-a1-m1-cX
42 6oml-a1-m1-cX 105 104 0.3902 0.3048 0.3077 7.91e-09 6oml-a1-m1-cY_6oml-a1-m1-cX
43 6sf3-a1-m2-cB 104 104 0.4390 0.3462 0.3462 6.53e-08 6sf3-a1-m1-cB_6sf3-a1-m2-cB
44 6sf3-a1-m1-cB 104 104 0.4390 0.3462 0.3462 6.53e-08 6sf3-a1-m1-cB_6sf3-a1-m2-cB
45 5nxs-a1-m1-cB 246 80 0.3659 0.1220 0.3750 1.40e-07 5nxs-a1-m1-cB_5nxs-a1-m1-cA
46 4n1d-a1-m2-cA 105 104 0.4146 0.3238 0.3269 3.54e-06 4n1d-a1-m1-cA_4n1d-a1-m2-cA
47 4n1d-a1-m1-cA 105 104 0.4146 0.3238 0.3269 3.54e-06 4n1d-a1-m1-cA_4n1d-a1-m2-cA
48 5vt2-a1-m1-cB 108 87 0.2683 0.2037 0.2529 8.14e-05 5vt2-a1-m1-cA_5vt2-a1-m1-cB
49 5vt2-a1-m1-cA 108 87 0.2683 0.2037 0.2529 8.14e-05 5vt2-a1-m1-cA_5vt2-a1-m1-cB
50 7l0j-a1-m2-cA 102 101 0.3049 0.2451 0.2475 0.15 7l0j-a1-m1-cA_7l0j-a1-m2-cA
51 7l0j-a1-m1-cA 102 101 0.3049 0.2451 0.2475 0.15 7l0j-a1-m1-cA_7l0j-a1-m2-cA
52 1qvb-a1-m2-cB 481 20 0.1098 0.0187 0.4500 4.2 1qvb-a1-m1-cA_1qvb-a1-m2-cB, 1qvb-a1-m2-cA_1qvb-a1-m2-cB
53 1qvb-a1-m2-cA 481 20 0.1098 0.0187 0.4500 4.2 1qvb-a1-m2-cA_1qvb-a1-m2-cB
54 1qvb-a1-m1-cA 481 20 0.1098 0.0187 0.4500 4.2 1qvb-a1-m1-cA_1qvb-a1-m2-cB
55 7sd3-a1-m1-cK 220 35 0.1463 0.0545 0.3429 4.5 7sd3-a1-m1-cK_7sd3-a1-m1-cG
56 7sd3-a1-m1-cG 220 35 0.1463 0.0545 0.3429 4.5 7sd3-a1-m1-cK_7sd3-a1-m1-cG
57 7xpo-a1-m1-cA 343 56 0.2073 0.0496 0.3036 7.0 7xpo-a1-m1-cB_7xpo-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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