Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=81)
ENDLEAIELARFAVAEHNSKTNAMLEFERLVKVRHQVVAGTMHHFTVQVKEAGGGKKLYE
AKVWEKVWENFKQLQSFQPVG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3ul5-a1-m1-cB 81 81 1.0000 1.0000 1.0000 1.69e-55 3ul5-a1-m1-cB_3ul5-a1-m1-cA
2 3ul5-a1-m1-cA 82 81 1.0000 0.9878 1.0000 2.12e-55 3ul5-a1-m1-cB_3ul5-a1-m1-cA
3 4tx4-a1-m1-cA 83 80 0.5926 0.5783 0.6000 1.48e-27 4tx4-a1-m1-cB_4tx4-a1-m1-cA
4 4tx4-a1-m1-cB 79 78 0.5802 0.5949 0.6026 1.15e-26 4tx4-a1-m1-cB_4tx4-a1-m1-cA
5 6vlp-a1-m2-cA 80 73 0.4938 0.5000 0.5479 2.58e-24 6vlp-a1-m1-cA_6vlp-a1-m2-cA
6 6vlp-a1-m1-cA 80 73 0.4938 0.5000 0.5479 2.58e-24 6vlp-a1-m1-cA_6vlp-a1-m2-cA
7 5ohv-a1-m1-cD 90 91 0.6049 0.5444 0.5385 2.30e-22 5ohv-a1-m1-cB_5ohv-a1-m1-cD
8 5a0o-a1-m1-cS 93 92 0.5926 0.5161 0.5217 7.43e-22 5a0o-a1-m1-cB_5a0o-a1-m1-cS
9 5a0o-a1-m1-cB 93 92 0.5926 0.5161 0.5217 7.43e-22 5a0o-a1-m1-cB_5a0o-a1-m1-cS
10 5ohv-a1-m1-cB 89 90 0.5926 0.5393 0.5333 1.09e-21 5ohv-a1-m1-cB_5ohv-a1-m1-cD
11 5ohl-a4-m1-cE 89 90 0.5802 0.5281 0.5222 5.58e-21 5ohl-a4-m1-cB_5ohl-a4-m1-cE
12 5ohl-a4-m1-cB 89 90 0.5802 0.5281 0.5222 5.58e-21 5ohl-a4-m1-cB_5ohl-a4-m1-cE
13 7c03-a2-m2-cA 312 88 0.4691 0.1218 0.4318 2.23e-10 7c03-a2-m1-cA_7c03-a2-m2-cA
14 7c03-a2-m1-cA 312 88 0.4691 0.1218 0.4318 2.23e-10 7c03-a2-m1-cA_7c03-a2-m2-cA
15 5kux-a2-m2-cA 92 78 0.3086 0.2717 0.3205 3.45e-04 5kux-a2-m1-cA_5kux-a2-m2-cA
16 5kux-a2-m1-cA 92 78 0.3086 0.2717 0.3205 3.45e-04 5kux-a2-m1-cA_5kux-a2-m2-cA
17 3qrd-a3-m2-cB 104 40 0.1975 0.1538 0.4000 0.14 3qrd-a3-m2-cB_3qrd-a3-m2-cA, 3qrd-a3-m2-cB_3qrd-a3-m4-cC
18 2ch9-a1-m2-cA 126 57 0.1975 0.1270 0.2807 0.14 2ch9-a1-m1-cA_2ch9-a1-m2-cA
19 2ch9-a1-m1-cA 126 57 0.1975 0.1270 0.2807 0.14 2ch9-a1-m1-cA_2ch9-a1-m2-cA
20 3qrd-a3-m4-cD 111 40 0.1975 0.1441 0.4000 0.16 3qrd-a3-m1-cA_3qrd-a3-m4-cD, 3qrd-a3-m4-cC_3qrd-a3-m4-cD
21 3qrd-a3-m2-cA 111 40 0.1975 0.1441 0.4000 0.16 3qrd-a3-m2-cB_3qrd-a3-m2-cA
22 3qrd-a3-m1-cA 111 40 0.1975 0.1441 0.4000 0.16 3qrd-a3-m1-cA_3qrd-a3-m4-cD
23 3qrd-a3-m4-cC 108 40 0.1975 0.1481 0.4000 0.17 3qrd-a3-m2-cB_3qrd-a3-m4-cC, 3qrd-a3-m4-cC_3qrd-a3-m4-cD
24 1r4c-a8-m5-cH 110 40 0.1852 0.1364 0.3750 0.41 1r4c-a8-m1-cC_1r4c-a8-m5-cH, 1r4c-a8-m1-cD_1r4c-a8-m5-cH
25 1r4c-a8-m5-cG 110 40 0.1852 0.1364 0.3750 0.41 1r4c-a8-m1-cD_1r4c-a8-m5-cG
26 1r4c-a8-m1-cD 110 40 0.1852 0.1364 0.3750 0.41 1r4c-a8-m1-cD_1r4c-a8-m5-cG, 1r4c-a8-m1-cD_1r4c-a8-m5-cH
27 1r4c-a8-m1-cC 110 40 0.1852 0.1364 0.3750 0.41 1r4c-a8-m1-cC_1r4c-a8-m5-cH
28 1tij-a1-m1-cA 114 40 0.1852 0.1316 0.3750 0.42 1tij-a1-m1-cB_1tij-a1-m1-cA
29 1tij-a1-m1-cB 112 40 0.1852 0.1339 0.3750 0.43 1tij-a1-m1-cB_1tij-a1-m1-cA
30 4zm8-a2-m1-cD 109 51 0.2099 0.1560 0.3333 0.68 4zm8-a2-m1-cC_4zm8-a2-m1-cD
31 4zm8-a2-m1-cC 109 51 0.2099 0.1560 0.3333 0.71 4zm8-a2-m1-cC_4zm8-a2-m1-cD
32 2nyt-a1-m1-cD 179 32 0.1605 0.0726 0.4062 1.3 2nyt-a1-m1-cD_2nyt-a1-m1-cC
33 3sva-a2-m8-cA 111 40 0.1728 0.1261 0.3500 3.4 3sva-a2-m2-cA_3sva-a2-m8-cA, 3sva-a2-m3-cA_3sva-a2-m8-cA, 3sva-a2-m4-cA_3sva-a2-m8-cA, 3sva-a2-m7-cA_3sva-a2-m8-cA
34 3sva-a2-m7-cA 111 40 0.1728 0.1261 0.3500 3.4 3sva-a2-m7-cA_3sva-a2-m8-cA
35 3sva-a2-m4-cA 111 40 0.1728 0.1261 0.3500 3.4 3sva-a2-m4-cA_3sva-a2-m8-cA
36 3sva-a2-m3-cA 111 40 0.1728 0.1261 0.3500 3.4 3sva-a2-m3-cA_3sva-a2-m8-cA
37 3sva-a2-m2-cA 111 40 0.1728 0.1261 0.3500 3.4 3sva-a2-m2-cA_3sva-a2-m8-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600