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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=56)
ENMYVNKVWVQCENENCLKWRLLSSEDSAKVDHDEPWYCFMNTDSRYNNCSISEED

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4o62-a1-m1-cC 56 56 1.0000 1.0000 1.0000 1.29e-36 4o62-a1-m1-cA_4o62-a1-m1-cC, 4o62-a1-m1-cC_4o62-a1-m1-cB
2 4o62-a1-m1-cA 56 56 1.0000 1.0000 1.0000 1.29e-36 4o62-a1-m1-cA_4o62-a1-m1-cC
3 4o62-a1-m1-cB 57 56 1.0000 0.9825 1.0000 1.33e-36 4o62-a1-m1-cC_4o62-a1-m1-cB
4 4z0o-a1-m2-cA 55 55 0.9821 1.0000 1.0000 5.75e-36 4z0o-a1-m1-cA_4z0o-a1-m2-cA
5 4z0o-a1-m1-cA 55 55 0.9821 1.0000 1.0000 5.75e-36 4z0o-a1-m1-cA_4z0o-a1-m2-cA
6 4qq4-a1-m1-cB 48 50 0.3571 0.4167 0.4000 1.59e-05 4qq4-a1-m1-cA_4qq4-a1-m1-cB
7 4qq4-a1-m1-cA 48 50 0.3571 0.4167 0.4000 1.59e-05 4qq4-a1-m1-cA_4qq4-a1-m1-cB
8 5ix1-a1-m1-cB 419 51 0.3750 0.0501 0.4118 6.35e-05 5ix1-a1-m1-cA_5ix1-a1-m1-cB
9 5ix1-a1-m1-cA 414 51 0.3750 0.0507 0.4118 6.67e-05 5ix1-a1-m1-cA_5ix1-a1-m1-cB
10 4fwj-a3-m1-cB 742 47 0.2679 0.0202 0.3191 6.03e-04 4fwj-a3-m1-cB_4fwj-a3-m1-cA
11 4gu1-a3-m1-cB 746 47 0.2857 0.0214 0.3404 0.005 4gu1-a3-m1-cA_4gu1-a3-m1-cB
12 4gu1-a3-m1-cA 746 47 0.2857 0.0214 0.3404 0.005 4gu1-a3-m1-cA_4gu1-a3-m1-cB
13 5ofb-a1-m1-cB 541 46 0.2857 0.0296 0.3478 0.020 5ofb-a1-m1-cA_5ofb-a1-m1-cB
14 5ofb-a1-m1-cA 534 46 0.2857 0.0300 0.3478 0.040 5ofb-a1-m1-cA_5ofb-a1-m1-cB
15 4fwj-a3-m1-cA 750 51 0.2679 0.0200 0.2941 0.042 4fwj-a3-m1-cB_4fwj-a3-m1-cA
16 4gu0-a2-m1-cD 735 47 0.2679 0.0204 0.3191 0.050 4gu0-a2-m1-cD_4gu0-a2-m1-cB
17 4gu0-a2-m1-cB 748 52 0.2679 0.0201 0.2885 0.055 4gu0-a2-m1-cD_4gu0-a2-m1-cB

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Reference:
Jacob Schwartz et al.

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