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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=79)
ENSEDQAKEKAKIAVSKYSKVLDGVHSKIVDLFKELEAIKQQTIFDIDNAKTEVEIDNLV
HDAFSKNATVAKFQKGLET

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7s0r-a1-m1-cB 79 79 1.0000 1.0000 1.0000 4.26e-51 7s0r-a1-m1-cB_7s0r-a1-m1-cA
2 7s0r-a1-m1-cA 82 81 0.9873 0.9512 0.9630 3.49e-48 7s0r-a1-m1-cB_7s0r-a1-m1-cA
3 3uf1-a2-m1-cC 105 51 0.2025 0.1524 0.3137 0.28 3uf1-a2-m1-cC_3uf1-a2-m1-cD
4 3uf1-a2-m1-cD 108 51 0.2025 0.1481 0.3137 0.33 3uf1-a2-m1-cC_3uf1-a2-m1-cD
5 5i08-a1-m1-cC 958 71 0.1899 0.0157 0.2113 1.4 5i08-a1-m1-cB_5i08-a1-m1-cC
6 5i08-a1-m1-cB 958 71 0.1899 0.0157 0.2113 1.4 5i08-a1-m1-cB_5i08-a1-m1-cC
7 3k2w-a2-m1-cF 483 63 0.2658 0.0435 0.3333 8.5 3k2w-a2-m1-cF_3k2w-a2-m1-cG, 3k2w-a2-m1-cF_3k2w-a2-m1-cH
8 3k2w-a2-m1-cG 484 63 0.2658 0.0434 0.3333 8.6 3k2w-a2-m1-cF_3k2w-a2-m1-cG, 3k2w-a2-m1-cG_3k2w-a2-m1-cH
9 5xne-a1-m1-cA 235 63 0.2405 0.0809 0.3016 8.8 5xne-a1-m1-cB_5xne-a1-m1-cA
10 5xne-a1-m1-cB 234 63 0.2405 0.0812 0.3016 9.3 5xne-a1-m1-cB_5xne-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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