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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=54)
ENSVFFGKKKKVSLHLLVDPDMKDEIIKYAQEKDFDNVSQAGREILKKGLEQIA

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3gxq-a1-m1-cB 54 54 1.0000 1.0000 1.0000 1.11e-33 3gxq-a1-m1-cA_3gxq-a1-m1-cB
2 3gxq-a1-m1-cA 53 53 0.9815 1.0000 1.0000 5.04e-33 3gxq-a1-m1-cA_3gxq-a1-m1-cB
3 2qgs-a1-m1-cA 201 59 0.2963 0.0796 0.2712 3.4 2qgs-a1-m1-cB_2qgs-a1-m1-cA
4 5zh8-a1-m1-cB 349 26 0.1852 0.0287 0.3846 3.7 5zh8-a1-m1-cB_5zh8-a1-m1-cA
5 5zh8-a1-m1-cA 358 26 0.1852 0.0279 0.3846 3.8 5zh8-a1-m1-cB_5zh8-a1-m1-cA
6 1r27-a4-m8-cD 465 23 0.1667 0.0194 0.3913 5.4 1r27-a4-m2-cB_1r27-a4-m8-cD
7 1r27-a4-m2-cB 465 23 0.1667 0.0194 0.3913 5.4 1r27-a4-m2-cB_1r27-a4-m8-cD
8 3egw-a1-m2-cB 509 23 0.1667 0.0177 0.3913 6.0 3egw-a1-m1-cB_3egw-a1-m2-cB
9 3egw-a1-m1-cB 509 23 0.1667 0.0177 0.3913 6.0 3egw-a1-m1-cB_3egw-a1-m2-cB
10 4g2e-a1-m2-cA 151 43 0.2407 0.0861 0.3023 8.7 4g2e-a1-m1-cA_4g2e-a1-m2-cA
11 4g2e-a1-m1-cA 151 43 0.2407 0.0861 0.3023 8.7 4g2e-a1-m1-cA_4g2e-a1-m2-cA
12 3od2-a1-m2-cB 129 25 0.1852 0.0775 0.4000 8.8 3od2-a1-m2-cB_3od2-a1-m1-cA
13 3od2-a1-m1-cA 132 25 0.1852 0.0758 0.4000 9.9 3od2-a1-m2-cB_3od2-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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