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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=93)
EPECNDITARLQYVKVGSCKSEVEVDIHYCQGKCASKAMYSIDINDVQDQCSCCSPTRTE
PMQVALHCTNGSVVYHEVLNAMECKCSPRKCSK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4nt5-a1-m2-cA 93 93 1.0000 1.0000 1.0000 2.85e-65 4nt5-a1-m1-cA_4nt5-a1-m2-cA
2 4nt5-a1-m1-cA 93 93 1.0000 1.0000 1.0000 2.85e-65 4nt5-a1-m1-cA_4nt5-a1-m2-cA
3 1nys-a1-m1-cB 85 62 0.1828 0.2000 0.2742 0.12 1nys-a1-m1-cD_1nys-a1-m1-cB
4 5hlz-a2-m1-cH 84 62 0.1828 0.2024 0.2742 0.25 5hlz-a2-m1-cH_5hlz-a2-m1-cF
5 5hlz-a2-m1-cF 86 62 0.1828 0.1977 0.2742 0.28 5hlz-a2-m1-cH_5hlz-a2-m1-cF
6 3ghg-a1-m1-cD 174 43 0.1183 0.0632 0.2558 0.50 3ghg-a1-m1-cA_3ghg-a1-m1-cD
7 3ghg-a1-m1-cA 174 43 0.1183 0.0632 0.2558 0.50 3ghg-a1-m1-cA_3ghg-a1-m1-cD
8 5cl1-a1-m1-cA 472 75 0.2043 0.0403 0.2533 0.80 5cl1-a1-m1-cB_5cl1-a1-m1-cA
9 5cl1-a1-m1-cB 470 75 0.2043 0.0404 0.2533 0.82 5cl1-a1-m1-cB_5cl1-a1-m1-cA
10 6bd1-a2-m1-cF 230 34 0.1398 0.0565 0.3824 1.4 6bd1-a2-m1-cE_6bd1-a2-m1-cF
11 6bd1-a2-m1-cE 230 34 0.1398 0.0565 0.3824 1.4 6bd1-a2-m1-cE_6bd1-a2-m1-cF
12 1nys-a1-m1-cD 75 38 0.1290 0.1600 0.3158 1.5 1nys-a1-m1-cD_1nys-a1-m1-cB
13 6sf3-a1-m2-cB 104 38 0.1505 0.1346 0.3684 1.9 6sf3-a1-m1-cB_6sf3-a1-m2-cB
14 6sf3-a1-m1-cB 104 38 0.1505 0.1346 0.3684 1.9 6sf3-a1-m1-cB_6sf3-a1-m2-cB
15 4mid-a1-m2-cA 105 74 0.1935 0.1714 0.2432 2.2 4mid-a1-m1-cA_4mid-a1-m2-cA
16 4mid-a1-m1-cA 105 74 0.1935 0.1714 0.2432 2.2 4mid-a1-m1-cA_4mid-a1-m2-cA
17 7khv-a3-m1-cF 539 46 0.1505 0.0260 0.3043 4.4 7khv-a3-m1-cF_7khv-a3-m1-cE
18 7khv-a3-m1-cE 586 46 0.1505 0.0239 0.3043 4.4 7khv-a3-m1-cF_7khv-a3-m1-cE
19 6umx-a1-m1-cB 273 28 0.0860 0.0293 0.2857 5.2 6umx-a1-m1-cB_6umx-a1-m1-cA
20 2br9-a1-m2-cA 230 34 0.1290 0.0522 0.3529 6.4 2br9-a1-m1-cA_2br9-a1-m2-cA
21 2br9-a1-m1-cA 230 34 0.1290 0.0522 0.3529 6.4 2br9-a1-m1-cA_2br9-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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