Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=83)
EPLYKLKAEFFKTLAHPARIRILELLVERDRSVGELDVGLNLSQQLGVLRRAGVVAYSIA
APDIAELLAVARKVLARVLSDRV

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Dimers
1 6jmi-a1-m1-cD 83 83 1.0000 1.0000 1.0000 4.27e-53 6jmi-a1-m1-cD_6jmi-a1-m1-cA
2 6jmi-a1-m1-cA 100 98 1.0000 0.8300 0.8469 4.95e-46 6jmi-a1-m1-cD_6jmi-a1-m1-cA
3 3pqk-a3-m1-cE 100 53 0.3253 0.2700 0.5094 1.41e-07 3pqk-a3-m1-cF_3pqk-a3-m1-cE
4 3pqk-a3-m1-cF 99 53 0.3253 0.2727 0.5094 1.58e-07 3pqk-a3-m1-cF_3pqk-a3-m1-cE
5 1r1v-a3-m2-cB 96 53 0.2771 0.2396 0.4340 3.80e-04 1r1v-a3-m2-cA_1r1v-a3-m2-cB
6 2kjb-a1-m1-cB 95 53 0.2771 0.2421 0.4340 3.86e-04 2kjb-a1-m1-cA_2kjb-a1-m1-cB
7 2kjb-a1-m1-cA 95 53 0.2771 0.2421 0.4340 3.86e-04 2kjb-a1-m1-cA_2kjb-a1-m1-cB
8 1r1v-a3-m2-cA 95 53 0.2771 0.2421 0.4340 3.86e-04 1r1v-a3-m2-cA_1r1v-a3-m2-cB
9 6cdb-a3-m4-cB 95 37 0.2289 0.2000 0.5135 4.87e-04 6cdb-a3-m2-cB_6cdb-a3-m4-cB, 6cdb-a3-m4-cB_6cdb-a3-m3-cA
10 6cdb-a3-m2-cB 95 37 0.2289 0.2000 0.5135 4.87e-04 6cdb-a3-m2-cB_6cdb-a3-m4-cB
11 6cdb-a3-m3-cA 97 37 0.2289 0.1959 0.5135 5.09e-04 6cdb-a3-m4-cB_6cdb-a3-m3-cA
12 4ooi-a1-m1-cA 95 51 0.2530 0.2211 0.4118 0.002 4ooi-a1-m1-cA_4ooi-a1-m1-cB
13 4ooi-a1-m1-cB 96 51 0.2530 0.2188 0.4118 0.002 4ooi-a1-m1-cA_4ooi-a1-m1-cB
14 4omz-a2-m1-cC 100 57 0.2651 0.2200 0.3860 0.008 4omz-a2-m1-cD_4omz-a2-m1-cC
15 4omz-a2-m1-cD 98 57 0.2651 0.2245 0.3860 0.008 4omz-a2-m1-cD_4omz-a2-m1-cC
16 6o8l-a1-m2-cA 92 72 0.2892 0.2609 0.3333 0.015 6o8l-a1-m1-cA_6o8l-a1-m2-cA
17 6o8l-a1-m1-cA 92 72 0.2892 0.2609 0.3333 0.015 6o8l-a1-m1-cA_6o8l-a1-m2-cA
18 4g6q-a4-m2-cB 165 48 0.2410 0.1212 0.4167 0.14 4g6q-a4-m1-cB_4g6q-a4-m2-cB, 4g6q-a4-m2-cB_4g6q-a4-m1-cA, 4g6q-a4-m2-cB_4g6q-a4-m2-cA
19 4g6q-a4-m1-cB 165 48 0.2410 0.1212 0.4167 0.14 4g6q-a4-m1-cB_4g6q-a4-m2-cB
20 4g6q-a4-m2-cA 174 48 0.2410 0.1149 0.4167 0.18 4g6q-a4-m2-cB_4g6q-a4-m2-cA
21 4g6q-a4-m1-cA 174 48 0.2410 0.1149 0.4167 0.18 4g6q-a4-m2-cB_4g6q-a4-m1-cA
22 7p6f-a3-m3-cDDD 97 54 0.2289 0.1959 0.3519 0.57 7p6f-a3-m1-cDDD_7p6f-a3-m3-cDDD
23 7p6f-a3-m1-cDDD 97 54 0.2289 0.1959 0.3519 0.57 7p6f-a3-m1-cDDD_7p6f-a3-m3-cDDD
24 2w37-a1-m2-cC 341 44 0.1566 0.0381 0.2955 1.6 2w37-a1-m1-cC_2w37-a1-m2-cC, 2w37-a1-m2-cB_2w37-a1-m2-cC
25 2w37-a1-m2-cB 341 44 0.1566 0.0381 0.2955 1.6 2w37-a1-m2-cB_2w37-a1-m2-cC
26 2w37-a1-m1-cC 341 44 0.1566 0.0381 0.2955 1.6 2w37-a1-m1-cC_2w37-a1-m2-cC
27 2jsc-a1-m1-cA 96 81 0.3133 0.2708 0.3210 2.1 2jsc-a1-m1-cA_2jsc-a1-m1-cB
28 2jsc-a1-m1-cB 97 53 0.2289 0.1959 0.3585 2.3 2jsc-a1-m1-cA_2jsc-a1-m1-cB
29 6p7k-a1-m6-cA 375 39 0.1807 0.0400 0.3846 2.8 6p7k-a1-m1-cA_6p7k-a1-m6-cA, 6p7k-a1-m3-cA_6p7k-a1-m6-cA
30 6p7k-a1-m3-cA 375 39 0.1807 0.0400 0.3846 2.8 6p7k-a1-m3-cA_6p7k-a1-m6-cA
31 6p7k-a1-m1-cA 375 39 0.1807 0.0400 0.3846 2.8 6p7k-a1-m1-cA_6p7k-a1-m6-cA
32 4heq-a1-m1-cB 145 49 0.2530 0.1448 0.4286 3.1 4heq-a1-m1-cA_4heq-a1-m1-cB
33 4heq-a1-m1-cA 145 49 0.2530 0.1448 0.4286 3.1 4heq-a1-m1-cA_4heq-a1-m1-cB
34 3cuo-a2-m1-cC 95 54 0.2289 0.2000 0.3519 4.8 3cuo-a2-m1-cD_3cuo-a2-m1-cC
35 3cuo-a2-m1-cD 94 54 0.2289 0.2021 0.3519 4.9 3cuo-a2-m1-cD_3cuo-a2-m1-cC
36 2r6o-a1-m1-cA 253 57 0.2048 0.0672 0.2982 7.1 2r6o-a1-m1-cB_2r6o-a1-m1-cA
37 2r6o-a1-m1-cB 238 57 0.2048 0.0714 0.2982 7.2 2r6o-a1-m1-cB_2r6o-a1-m1-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600