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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=71)
EPNPTTIAFQVDCYLWHLKKTLSMMGEVDAPFEDRLRREQKALKGRSMTLGIDIQSATQE
GYYKIKSITEE

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5h5n-a1-m1-cB 71 71 1.0000 1.0000 1.0000 6.37e-50 5h5n-a1-m1-cA_5h5n-a1-m1-cB
2 5h5n-a1-m1-cA 71 71 1.0000 1.0000 1.0000 6.37e-50 5h5n-a1-m1-cA_5h5n-a1-m1-cB
3 6sx0-a1-m1-cB 71 66 0.5493 0.5493 0.5909 6.45e-25 6sx0-a1-m1-cA_6sx0-a1-m1-cB
4 6sx0-a1-m1-cA 70 66 0.5493 0.5571 0.5909 6.78e-25 6sx0-a1-m1-cA_6sx0-a1-m1-cB
5 1ail-a1-m2-cA 70 64 0.4507 0.4571 0.5000 9.34e-19 1ail-a1-m1-cA_1ail-a1-m2-cA
6 1ail-a1-m1-cA 70 64 0.4507 0.4571 0.5000 9.34e-19 1ail-a1-m1-cA_1ail-a1-m2-cA
7 3fg1-a5-m1-cD 681 64 0.2394 0.0250 0.2656 3.1 3fg1-a5-m1-cD_3fg1-a5-m1-cA
8 3fg1-a5-m1-cC 683 64 0.2394 0.0249 0.2656 3.1 3fg1-a5-m1-cC_3fg1-a5-m1-cA
9 3fg1-a5-m1-cB 682 64 0.2394 0.0249 0.2656 3.1 3fg1-a5-m1-cB_3fg1-a5-m1-cA
10 3fg1-a5-m1-cA 684 64 0.2394 0.0249 0.2656 3.2 3fg1-a5-m1-cB_3fg1-a5-m1-cA, 3fg1-a5-m1-cC_3fg1-a5-m1-cA, 3fg1-a5-m1-cD_3fg1-a5-m1-cA
11 3ukm-a2-m1-cD 252 23 0.1408 0.0397 0.4348 5.6 3ukm-a2-m1-cC_3ukm-a2-m1-cD
12 3ukm-a2-m1-cC 252 23 0.1408 0.0397 0.4348 5.6 3ukm-a2-m1-cC_3ukm-a2-m1-cD
13 4ix1-a4-m1-cD 230 59 0.2535 0.0783 0.3051 5.8 4ix1-a4-m1-cD_4ix1-a4-m1-cH
14 2g1l-a2-m2-cA 103 34 0.1549 0.1068 0.3235 5.9 2g1l-a2-m1-cA_2g1l-a2-m2-cA
15 2g1l-a2-m1-cA 103 34 0.1549 0.1068 0.3235 5.9 2g1l-a2-m1-cA_2g1l-a2-m2-cA
16 4ix1-a4-m1-cH 230 59 0.2535 0.0783 0.3051 5.9 4ix1-a4-m1-cD_4ix1-a4-m1-cH
17 2cgz-a1-m6-cA 100 17 0.1127 0.0800 0.4706 6.0 2cgz-a1-m5-cA_2cgz-a1-m6-cA
18 2cgz-a1-m5-cA 100 17 0.1127 0.0800 0.4706 6.0 2cgz-a1-m5-cA_2cgz-a1-m6-cA
19 3ro6-a3-m1-cD 344 50 0.1972 0.0407 0.2800 7.8 3ro6-a3-m1-cD_3ro6-a3-m1-cE
20 3ro6-a3-m1-cE 344 50 0.1972 0.0407 0.2800 8.3 3ro6-a3-m1-cD_3ro6-a3-m1-cE
21 5im6-a1-m3-ci 148 27 0.1408 0.0676 0.3704 9.3 5im6-a1-m3-cg_5im6-a1-m3-ci
22 5im6-a1-m3-cg 148 27 0.1408 0.0676 0.3704 9.3 5im6-a1-m3-cg_5im6-a1-m3-ci

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Reference:
Jacob Schwartz et al.

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