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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=77)
EPSTVIMREAARHGLTIVRLQPQGSRLSLTVQPADFQALMAWLDALGQAGMTTATLAVTA
VAQQPGWVTVNTLVLER

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 8ab1-a1-m1-cD 77 77 1.0000 1.0000 1.0000 2.07e-50 8ab1-a1-m1-cB_8ab1-a1-m1-cD
2 8ab1-a1-m1-cB 77 77 1.0000 1.0000 1.0000 2.07e-50 8ab1-a1-m1-cB_8ab1-a1-m1-cD
3 8a9x-a2-m1-cB 77 77 1.0000 1.0000 1.0000 2.07e-50 8a9x-a2-m1-cB_8a9x-a2-m4-cF
4 8a9x-a2-m4-cF 78 77 1.0000 0.9872 1.0000 2.20e-50 8a9x-a2-m1-cB_8a9x-a2-m4-cF
5 4bff-a4-m1-cB 123 51 0.2338 0.1463 0.3529 0.073 4bff-a4-m1-cA_4bff-a4-m1-cB, 4bff-a4-m1-cB_4bff-a4-m1-cC
6 4bff-a4-m1-cA 123 51 0.2338 0.1463 0.3529 0.073 4bff-a4-m1-cA_4bff-a4-m1-cB, 4bff-a4-m1-cA_4bff-a4-m1-cC
7 4bff-a4-m1-cC 124 51 0.2338 0.1452 0.3529 0.074 4bff-a4-m1-cA_4bff-a4-m1-cC, 4bff-a4-m1-cB_4bff-a4-m1-cC
8 2xit-a1-m1-cB 278 59 0.2727 0.0755 0.3559 5.8 2xit-a1-m1-cA_2xit-a1-m1-cB
9 7nfc-a1-m1-cA 3562 26 0.1429 0.0031 0.4231 8.3 7nfc-a1-m1-cF_7nfc-a1-m1-cA
10 7nfc-a1-m1-cF 3557 26 0.1429 0.0031 0.4231 8.4 7nfc-a1-m1-cF_7nfc-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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