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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=35)
EQCVKKDELCIPYYLDCCEPLECKKVNWWDHKCIG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5oll-a1-m3-cA 35 35 1.0000 1.0000 1.0000 4.86e-20 5oll-a1-m2-cA_5oll-a1-m3-cA
2 5oll-a1-m2-cA 35 35 1.0000 1.0000 1.0000 4.86e-20 5oll-a1-m2-cA_5oll-a1-m3-cA
3 2a5h-a1-m1-cC 400 19 0.2571 0.0225 0.4737 6.8 2a5h-a1-m1-cC_2a5h-a1-m1-cD
4 2a5h-a1-m1-cA 400 19 0.2571 0.0225 0.4737 6.8 2a5h-a1-m1-cA_2a5h-a1-m1-cD
5 2a5h-a1-m1-cD 401 19 0.2571 0.0224 0.4737 6.8 2a5h-a1-m1-cA_2a5h-a1-m1-cD, 2a5h-a1-m1-cB_2a5h-a1-m1-cD, 2a5h-a1-m1-cC_2a5h-a1-m1-cD
6 2a5h-a1-m1-cB 401 19 0.2571 0.0224 0.4737 6.8 2a5h-a1-m1-cB_2a5h-a1-m1-cD
7 7v4t-a1-m9-cM 437 20 0.2000 0.0160 0.3500 7.1 7v4t-a1-m24-cI_7v4t-a1-m9-cM
8 7v4t-a1-m24-cI 437 20 0.2000 0.0160 0.3500 7.1 7v4t-a1-m24-cI_7v4t-a1-m9-cM
9 7wc2-a1-m9-cG 438 20 0.2000 0.0160 0.3500 7.1 7wc2-a1-m9-cA_7wc2-a1-m9-cG
10 7wc2-a1-m9-cA 438 20 0.2000 0.0160 0.3500 7.1 7wc2-a1-m9-cA_7wc2-a1-m9-cG

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Reference:
Jacob Schwartz et al.

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