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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=65)
EQDCKYWPNCANPLCAFRHPTMPPCRNGGECKVPGCKFTHLKTPCKFRPCTNRSCPFLHE
EGQRG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4lj0-a1-m1-cA 65 65 1.0000 1.0000 1.0000 7.76e-44 4lj0-a1-m1-cB_4lj0-a1-m1-cA
2 4lj0-a1-m1-cB 64 64 0.9846 1.0000 1.0000 5.34e-43 4lj0-a1-m1-cB_4lj0-a1-m1-cA
3 5l2l-a1-m1-cA 72 65 0.3385 0.3056 0.3385 0.001 5l2l-a1-m1-cA_5l2l-a1-m1-cB
4 5l2l-a1-m1-cB 74 65 0.3385 0.2973 0.3385 0.002 5l2l-a1-m1-cA_5l2l-a1-m1-cB
5 2rhk-a3-m1-cD 60 46 0.2154 0.2333 0.3043 1.0 2rhk-a3-m1-cD_2rhk-a3-m1-cC
6 2rhk-a2-m2-cD 60 46 0.2154 0.2333 0.3043 1.0 2rhk-a2-m2-cD_2rhk-a2-m1-cC
7 2rhk-a3-m1-cC 63 46 0.2154 0.2222 0.3043 1.3 2rhk-a3-m1-cD_2rhk-a3-m1-cC
8 2rhk-a2-m1-cC 63 46 0.2154 0.2222 0.3043 1.3 2rhk-a2-m2-cD_2rhk-a2-m1-cC

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Reference:
Jacob Schwartz et al.

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