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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=91)
EQLNGIFQALADPTRRAVLGRLSRGPATVSELAKPFDMALPSFMKHIHFLEDSGWIRTHK
QGRVRTCAIEKEPFTAVEAWLAEQQELWESR

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3f6o-a2-m2-cA 97 91 1.0000 0.9381 1.0000 1.44e-64 3f6o-a2-m1-cA_3f6o-a2-m2-cA
2 3f6o-a2-m1-cA 97 91 1.0000 0.9381 1.0000 1.44e-64 3f6o-a2-m1-cA_3f6o-a2-m2-cA
3 3f6o-a1-m1-cA 97 91 1.0000 0.9381 1.0000 1.44e-64 3f6o-a1-m1-cB_3f6o-a1-m1-cA
4 3f6o-a1-m1-cB 91 91 1.0000 1.0000 1.0000 2.05e-64 3f6o-a1-m1-cB_3f6o-a1-m1-cA
5 2p4w-a1-m1-cA 197 59 0.2088 0.0964 0.3220 2.11e-06 2p4w-a1-m1-cA_2p4w-a1-m1-cB
6 2p4w-a1-m1-cB 198 59 0.2088 0.0960 0.3220 2.19e-06 2p4w-a1-m1-cA_2p4w-a1-m1-cB
7 7p6f-a3-m3-cDDD 97 50 0.2088 0.1959 0.3800 3.19e-06 7p6f-a3-m1-cDDD_7p6f-a3-m3-cDDD
8 7p6f-a3-m1-cDDD 97 50 0.2088 0.1959 0.3800 3.19e-06 7p6f-a3-m1-cDDD_7p6f-a3-m3-cDDD
9 2oqg-a1-m1-cB 107 62 0.2198 0.1869 0.3226 2.58e-05 2oqg-a1-m1-cA_2oqg-a1-m1-cB, 2oqg-a1-m1-cD_2oqg-a1-m1-cB
10 2oqg-a1-m1-cD 105 62 0.2198 0.1905 0.3226 3.02e-05 2oqg-a1-m1-cC_2oqg-a1-m1-cD, 2oqg-a1-m1-cD_2oqg-a1-m1-cA, 2oqg-a1-m1-cD_2oqg-a1-m1-cB
11 2oqg-a1-m1-cC 105 62 0.2198 0.1905 0.3226 3.02e-05 2oqg-a1-m1-cC_2oqg-a1-m1-cD
12 2oqg-a1-m1-cA 107 62 0.2198 0.1869 0.3226 3.51e-05 2oqg-a1-m1-cA_2oqg-a1-m1-cB, 2oqg-a1-m1-cD_2oqg-a1-m1-cA
13 6j0e-a1-m1-cA 124 84 0.2418 0.1774 0.2619 3.70e-05 6j0e-a1-m1-cA_6j0e-a1-m1-cB
14 6j0e-a1-m1-cB 125 84 0.2418 0.1760 0.2619 3.91e-05 6j0e-a1-m1-cA_6j0e-a1-m1-cB
15 3f6v-a1-m2-cA 96 69 0.2198 0.2083 0.2899 4.41e-05 3f6v-a1-m1-cA_3f6v-a1-m2-cA
16 3f6v-a1-m1-cA 96 69 0.2198 0.2083 0.2899 4.41e-05 3f6v-a1-m1-cA_3f6v-a1-m2-cA
17 2lkp-a1-m1-cB 119 62 0.2088 0.1597 0.3065 7.11e-04 2lkp-a1-m1-cA_2lkp-a1-m1-cB
18 2lkp-a1-m1-cA 119 62 0.2088 0.1597 0.3065 7.11e-04 2lkp-a1-m1-cA_2lkp-a1-m1-cB
19 3cuo-a2-m1-cC 95 82 0.2308 0.2211 0.2561 0.003 3cuo-a2-m1-cD_3cuo-a2-m1-cC
20 3cuo-a2-m1-cD 94 82 0.2308 0.2234 0.2561 0.003 3cuo-a2-m1-cD_3cuo-a2-m1-cC
21 5duk-a1-m1-cB 65 51 0.1758 0.2462 0.3137 0.019 5duk-a1-m1-cA_5duk-a1-m1-cB
22 7txn-a1-m1-cB 105 61 0.2198 0.1905 0.3279 0.021 7txn-a1-m1-cA_7txn-a1-m1-cB
23 7txn-a1-m1-cA 104 61 0.2198 0.1923 0.3279 0.027 7txn-a1-m1-cA_7txn-a1-m1-cB
24 5duk-a1-m1-cA 58 46 0.1538 0.2414 0.3043 0.042 5duk-a1-m1-cA_5duk-a1-m1-cB
25 1ub9-a1-m2-cA 100 81 0.2637 0.2400 0.2963 0.043 1ub9-a1-m1-cA_1ub9-a1-m2-cA
26 1ub9-a1-m1-cA 100 81 0.2637 0.2400 0.2963 0.043 1ub9-a1-m1-cA_1ub9-a1-m2-cA
27 1mkm-a1-m2-cA 246 39 0.1429 0.0528 0.3333 0.044 1mkm-a1-m1-cA_1mkm-a1-m2-cA, 1mkm-a1-m2-cA_1mkm-a1-m2-cB
28 1mkm-a1-m1-cA 246 39 0.1429 0.0528 0.3333 0.044 1mkm-a1-m1-cA_1mkm-a1-m2-cA, 1mkm-a1-m1-cA_1mkm-a1-m2-cB
29 1mkm-a1-m2-cB 247 39 0.1429 0.0526 0.3333 0.049 1mkm-a1-m1-cA_1mkm-a1-m2-cB, 1mkm-a1-m2-cA_1mkm-a1-m2-cB
30 2jsc-a1-m1-cA 96 56 0.1868 0.1771 0.3036 0.078 2jsc-a1-m1-cA_2jsc-a1-m1-cB
31 2jsc-a1-m1-cB 97 56 0.1868 0.1753 0.3036 0.084 2jsc-a1-m1-cA_2jsc-a1-m1-cB
32 5kvr-a1-m2-cA 77 32 0.1429 0.1688 0.4062 1.5 5kvr-a1-m1-cA_5kvr-a1-m2-cA
33 5kvr-a1-m1-cA 77 32 0.1429 0.1688 0.4062 1.5 5kvr-a1-m1-cA_5kvr-a1-m2-cA
34 1uly-a1-m2-cA 185 62 0.2088 0.1027 0.3065 2.0 1uly-a1-m1-cA_1uly-a1-m2-cA
35 1uly-a1-m1-cA 185 62 0.2088 0.1027 0.3065 2.0 1uly-a1-m1-cA_1uly-a1-m2-cA
36 4omz-a2-m1-cD 98 79 0.1648 0.1531 0.1899 2.2 4omz-a2-m1-cD_4omz-a2-m1-cC
37 4omz-a2-m1-cC 100 59 0.1429 0.1300 0.2203 2.4 4omz-a2-m1-cD_4omz-a2-m1-cC
38 6rcl-a1-m1-cA 180 22 0.1099 0.0556 0.4545 2.5 6rcl-a1-m1-cB_6rcl-a1-m1-cA
39 6rcl-a1-m1-cB 148 22 0.1099 0.0676 0.4545 2.6 6rcl-a1-m1-cB_6rcl-a1-m1-cA
40 6j80-a1-m1-cB 181 22 0.1099 0.0552 0.4545 2.6 6j80-a1-m1-cA_6j80-a1-m1-cB
41 4qn9-a1-m1-cB 322 44 0.1758 0.0497 0.3636 2.9 4qn9-a1-m1-cA_4qn9-a1-m1-cB
42 4qn9-a1-m1-cA 321 44 0.1758 0.0498 0.3636 3.0 4qn9-a1-m1-cA_4qn9-a1-m1-cB
43 6j80-a1-m1-cA 138 22 0.1099 0.0725 0.4545 3.2 6j80-a1-m1-cA_6j80-a1-m1-cB
44 2prx-a1-m1-cA 110 21 0.0989 0.0818 0.4286 6.9 2prx-a1-m1-cA_2prx-a1-m1-cB
45 3k2z-a1-m1-cB 195 46 0.1648 0.0769 0.3261 7.2 3k2z-a1-m1-cA_3k2z-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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