Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=52)
EQVFAAECILSKRLRKGKLEYLVKWRGWSSKHNSWEPEENILDPRLLLAFQK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3h91-a3-m2-cB 52 52 1.0000 1.0000 1.0000 3.87e-33 3h91-a3-m1-cB_3h91-a3-m2-cB
2 3h91-a3-m1-cB 52 52 1.0000 1.0000 1.0000 3.87e-33 3h91-a3-m1-cB_3h91-a3-m2-cB
3 4x3t-a2-m1-cF 56 51 0.6538 0.6071 0.6667 2.08e-22 4x3t-a2-m1-cF_4x3t-a2-m1-cC
4 4x3t-a3-m1-cD 62 51 0.6538 0.5484 0.6667 2.11e-22 4x3t-a3-m1-cE_4x3t-a3-m1-cD
5 4x3t-a2-m1-cC 62 51 0.6538 0.5484 0.6667 2.11e-22 4x3t-a2-m1-cF_4x3t-a2-m1-cC
6 5ejw-a2-m2-cA 80 52 0.6538 0.4250 0.6538 2.78e-22 5ejw-a2-m1-cA_5ejw-a2-m2-cA
7 5ejw-a2-m1-cA 80 52 0.6538 0.4250 0.6538 2.78e-22 5ejw-a2-m1-cA_5ejw-a2-m2-cA
8 4x3t-a3-m1-cE 51 48 0.6346 0.6471 0.6875 7.65e-21 4x3t-a3-m1-cE_4x3t-a3-m1-cD
9 1pfb-a2-m2-cA 55 50 0.5192 0.4909 0.5400 8.08e-17 1pfb-a2-m1-cA_1pfb-a2-m2-cA
10 1pfb-a2-m1-cA 55 50 0.5192 0.4909 0.5400 8.08e-17 1pfb-a2-m1-cA_1pfb-a2-m2-cA
11 3f2u-a1-m2-cA 51 47 0.4423 0.4510 0.4894 7.54e-13 3f2u-a1-m1-cA_3f2u-a1-m2-cA
12 3f2u-a1-m1-cA 51 47 0.4423 0.4510 0.4894 7.54e-13 3f2u-a1-m1-cA_3f2u-a1-m2-cA
13 3dm1-a5-m1-cC 52 47 0.4231 0.4231 0.4681 2.09e-12 3dm1-a5-m1-cC_3dm1-a5-m1-cE, 3dm1-a5-m1-cC_3dm1-a5-m1-cG
14 3dm1-a5-m1-cA 52 47 0.4231 0.4231 0.4681 2.09e-12 3dm1-a5-m1-cA_3dm1-a5-m1-cG
15 3dm1-a5-m1-cG 53 47 0.4231 0.4151 0.4681 2.34e-12 3dm1-a5-m1-cA_3dm1-a5-m1-cG, 3dm1-a5-m1-cC_3dm1-a5-m1-cG, 3dm1-a5-m1-cE_3dm1-a5-m1-cG
16 3dm1-a5-m1-cE 53 47 0.4231 0.4151 0.4681 2.34e-12 3dm1-a5-m1-cC_3dm1-a5-m1-cE, 3dm1-a5-m1-cE_3dm1-a5-m1-cG
17 3lwe-a4-m1-cB 59 53 0.4231 0.3729 0.4151 1.52e-08 3lwe-a4-m1-cB_3lwe-a4-m1-cA
18 3lwe-a3-m2-cB 59 53 0.4231 0.3729 0.4151 1.52e-08 3lwe-a3-m2-cB_3lwe-a3-m1-cA
19 3lwe-a4-m1-cA 61 53 0.4231 0.3607 0.4151 1.65e-08 3lwe-a4-m1-cB_3lwe-a4-m1-cA
20 3lwe-a3-m1-cA 61 53 0.4231 0.3607 0.4151 1.65e-08 3lwe-a3-m2-cB_3lwe-a3-m1-cA
21 4quf-a2-m1-cD 58 38 0.3269 0.2931 0.4474 3.92e-07 4quf-a2-m1-cD_4quf-a2-m1-cC
22 4quf-a2-m1-cC 61 38 0.3269 0.2787 0.4474 4.93e-07 4quf-a2-m1-cD_4quf-a2-m1-cC
23 5jjz-a2-m2-cA 59 42 0.3462 0.3051 0.4286 5.44e-07 5jjz-a2-m1-cA_5jjz-a2-m2-cA
24 5jjz-a2-m1-cA 59 42 0.3462 0.3051 0.4286 5.44e-07 5jjz-a2-m1-cA_5jjz-a2-m2-cA
25 7slw-a2-m1-cE 56 42 0.3462 0.3214 0.4286 5.63e-07 7slw-a2-m1-cE_7slw-a2-m1-cF
26 7slw-a2-m1-cF 57 42 0.3462 0.3158 0.4286 5.69e-07 7slw-a2-m1-cE_7slw-a2-m1-cF
27 2b2w-a1-m1-cC 86 32 0.2885 0.1744 0.4688 2.35e-06 2b2w-a1-m1-cC_2b2w-a1-m1-cA
28 2b2w-a1-m1-cA 177 32 0.2885 0.0847 0.4688 7.68e-06 2b2w-a1-m1-cB_2b2w-a1-m1-cA, 2b2w-a1-m1-cC_2b2w-a1-m1-cA
29 2b2w-a1-m1-cB 175 25 0.2692 0.0800 0.5600 9.41e-06 2b2w-a1-m1-cB_2b2w-a1-m1-cA
30 7vrf-a1-m1-cB 60 46 0.3269 0.2833 0.3696 2.05e-05 7vrf-a1-m1-cB_7vrf-a1-m1-cA
31 7vrf-a1-m1-cA 61 46 0.3269 0.2787 0.3696 2.19e-05 7vrf-a1-m1-cB_7vrf-a1-m1-cA
32 4ft2-a1-m1-cA 674 29 0.1731 0.0134 0.3103 0.069 4ft2-a1-m1-cB_4ft2-a1-m1-cA
33 4ft2-a1-m1-cB 670 29 0.1731 0.0134 0.3103 0.070 4ft2-a1-m1-cB_4ft2-a1-m1-cA
34 3mwy-a2-m2-cW 696 26 0.2308 0.0172 0.4615 0.11 3mwy-a2-m1-cW_3mwy-a2-m2-cW
35 3mwy-a2-m2-cW 696 36 0.2692 0.0201 0.3889 1.0 3mwy-a2-m1-cW_3mwy-a2-m2-cW
36 3mwy-a2-m1-cW 696 26 0.2308 0.0172 0.4615 0.11 3mwy-a2-m1-cW_3mwy-a2-m2-cW
37 3mwy-a2-m1-cW 696 36 0.2692 0.0201 0.3889 1.0 3mwy-a2-m1-cW_3mwy-a2-m2-cW
38 2h1e-a2-m2-cA 166 26 0.2308 0.0723 0.4615 0.19 2h1e-a2-m2-cB_2h1e-a2-m2-cA
39 2h1e-a2-m2-cA 166 38 0.2885 0.0904 0.3947 0.51 2h1e-a2-m2-cB_2h1e-a2-m2-cA
40 2h1e-a2-m1-cA 166 26 0.2308 0.0723 0.4615 0.19 2h1e-a2-m2-cB_2h1e-a2-m1-cA
41 2h1e-a2-m1-cA 166 38 0.2885 0.0904 0.3947 0.51 2h1e-a2-m2-cB_2h1e-a2-m1-cA
42 2h1e-a2-m2-cB 163 26 0.2308 0.0736 0.4615 0.19 2h1e-a2-m1-cB_2h1e-a2-m2-cB, 2h1e-a2-m2-cB_2h1e-a2-m1-cA, 2h1e-a2-m2-cB_2h1e-a2-m2-cA
43 2h1e-a2-m2-cB 163 37 0.2692 0.0859 0.3784 2.0 2h1e-a2-m1-cB_2h1e-a2-m2-cB, 2h1e-a2-m2-cB_2h1e-a2-m1-cA, 2h1e-a2-m2-cB_2h1e-a2-m2-cA
44 2h1e-a2-m1-cB 163 26 0.2308 0.0736 0.4615 0.19 2h1e-a2-m1-cB_2h1e-a2-m2-cB
45 2h1e-a2-m1-cB 163 37 0.2692 0.0859 0.3784 2.0 2h1e-a2-m1-cB_2h1e-a2-m2-cB
46 6bph-a1-m2-cA 66 44 0.2308 0.1818 0.2727 0.27 6bph-a1-m1-cA_6bph-a1-m2-cA
47 6bph-a1-m1-cA 66 44 0.2308 0.1818 0.2727 0.27 6bph-a1-m1-cA_6bph-a1-m2-cA
48 1ems-a1-m2-cA 412 44 0.2885 0.0364 0.3409 3.7 1ems-a1-m2-cB_1ems-a1-m2-cA
49 1ems-a1-m2-cB 410 44 0.2885 0.0366 0.3409 3.7 1ems-a1-m1-cB_1ems-a1-m2-cB, 1ems-a1-m2-cB_1ems-a1-m2-cA
50 1ems-a1-m1-cB 410 44 0.2885 0.0366 0.3409 3.7 1ems-a1-m1-cB_1ems-a1-m2-cB
51 3oa6-a1-m1-cB 84 38 0.2115 0.1310 0.2895 3.8 3oa6-a1-m1-cA_3oa6-a1-m1-cB
52 3oa6-a1-m1-cA 84 38 0.2115 0.1310 0.2895 3.8 3oa6-a1-m1-cA_3oa6-a1-m1-cB
53 3kup-a1-m1-cA 59 44 0.2308 0.2034 0.2727 3.8 3kup-a1-m1-cA_3kup-a1-m1-cB
54 3kup-a1-m1-cB 62 44 0.2308 0.1935 0.2727 3.9 3kup-a1-m1-cA_3kup-a1-m1-cB
55 5wyr-a1-m1-cB 248 34 0.2115 0.0444 0.3235 4.4 5wyr-a1-m1-cA_5wyr-a1-m1-cB
56 7eew-a1-m2-cA 610 28 0.2308 0.0197 0.4286 4.6 7eew-a1-m1-cA_7eew-a1-m2-cA
57 7eew-a1-m1-cA 610 28 0.2308 0.0197 0.4286 4.6 7eew-a1-m1-cA_7eew-a1-m2-cA
58 5wyr-a1-m1-cA 242 34 0.2115 0.0455 0.3235 4.7 5wyr-a1-m1-cA_5wyr-a1-m1-cB

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600