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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=87)
EQVWHVLDVEPSSPAALAGLRPYTDYVVGSDFFTLIESHEGKPLKLMVYNSKSDSCREVT
VTPNAAWGGEGSLGCGIGYGYLHRIPT

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6g8w-a1-m1-cB 87 87 1.0000 1.0000 1.0000 1.18e-61 6g8w-a1-m1-cB_6g8w-a1-m1-cA
2 6g8w-a1-m1-cA 92 91 1.0000 0.9457 0.9560 1.38e-59 6g8w-a1-m1-cB_6g8w-a1-m1-cA
3 7w70-a1-m1-cB 87 66 0.2644 0.2644 0.3485 0.17 7w70-a1-m1-cA_7w70-a1-m1-cB
4 7w70-a1-m1-cA 87 66 0.2644 0.2644 0.3485 0.17 7w70-a1-m1-cA_7w70-a1-m1-cB
5 2eb0-a1-m1-cA 304 45 0.1954 0.0559 0.3778 3.1 2eb0-a1-m1-cA_2eb0-a1-m1-cB
6 2eb0-a1-m1-cB 307 45 0.1954 0.0554 0.3778 3.1 2eb0-a1-m1-cA_2eb0-a1-m1-cB
7 2ego-a1-m1-cA 88 22 0.1494 0.1477 0.5909 4.2 2ego-a1-m1-cA_2ego-a1-m1-cB
8 2ego-a1-m1-cB 90 22 0.1494 0.1444 0.5909 4.5 2ego-a1-m1-cA_2ego-a1-m1-cB
9 1z0a-a6-m1-cD 158 42 0.1379 0.0759 0.2857 5.4 1z0a-a6-m1-cD_1z0a-a6-m1-cC
10 4l8n-a1-m2-cA 440 18 0.1149 0.0227 0.5556 6.0 4l8n-a1-m1-cA_4l8n-a1-m2-cA
11 4l8n-a1-m1-cA 440 18 0.1149 0.0227 0.5556 6.0 4l8n-a1-m1-cA_4l8n-a1-m2-cA
12 7tym-a1-m1-cB 771 72 0.2414 0.0272 0.2917 6.0 7tym-a1-m1-cA_7tym-a1-m1-cB
13 7tym-a1-m1-cA 771 72 0.2414 0.0272 0.2917 6.0 7tym-a1-m1-cA_7tym-a1-m1-cB
14 3r68-a2-m2-cA 85 23 0.1379 0.1412 0.5217 8.0 3r68-a2-m1-cA_3r68-a2-m2-cA
15 3r68-a2-m1-cA 85 23 0.1379 0.1412 0.5217 8.0 3r68-a2-m1-cA_3r68-a2-m2-cA
16 3r69-a3-m1-cB 87 23 0.1379 0.1379 0.5217 8.4 3r69-a3-m1-cA_3r69-a3-m1-cB
17 1nl0-a2-m2-cL 213 23 0.0920 0.0376 0.3478 9.1 1nl0-a2-m2-cL_1nl0-a2-m1-cL
18 1nl0-a2-m1-cL 213 23 0.0920 0.0376 0.3478 9.1 1nl0-a2-m2-cL_1nl0-a2-m1-cL
19 3r69-a3-m1-cA 85 23 0.1379 0.1412 0.5217 9.3 3r69-a3-m1-cA_3r69-a3-m1-cB

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Reference:
Jacob Schwartz et al.

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