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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=99)
ERILHGLITLYILKELVKRPHGYELQKSFETTGQALPGSIYILLKTKERGFVISESSVNE
KGQQLTVYHITDAGKKFLDHSQALQLARKIIDDLLSTVD

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3elk-a2-m1-cB 99 99 1.0000 1.0000 1.0000 4.93e-68 3elk-a2-m1-cB_3elk-a2-m1-cA
2 3elk-a1-m2-cB 99 99 1.0000 1.0000 1.0000 4.93e-68 3elk-a1-m1-cB_3elk-a1-m2-cB
3 3elk-a1-m1-cB 99 99 1.0000 1.0000 1.0000 4.93e-68 3elk-a1-m1-cB_3elk-a1-m2-cB
4 3elk-a2-m1-cA 101 100 0.9899 0.9703 0.9800 1.51e-63 3elk-a2-m1-cB_3elk-a2-m1-cA
5 3hhh-a1-m1-cB 101 94 0.3030 0.2970 0.3191 0.002 3hhh-a1-m1-cA_3hhh-a1-m1-cB
6 3l7w-a1-m2-cA 104 92 0.2121 0.2019 0.2283 0.007 3l7w-a1-m1-cA_3l7w-a1-m2-cA
7 3l7w-a1-m1-cA 104 92 0.2121 0.2019 0.2283 0.007 3l7w-a1-m1-cA_3l7w-a1-m2-cA
8 4esb-a1-m2-cA 103 97 0.2727 0.2621 0.2784 0.11 4esb-a1-m1-cA_4esb-a1-m2-cA
9 4esb-a1-m1-cA 103 97 0.2727 0.2621 0.2784 0.11 4esb-a1-m1-cA_4esb-a1-m2-cA
10 2esh-a2-m2-cA 114 67 0.2222 0.1930 0.3284 0.28 2esh-a2-m1-cA_2esh-a2-m2-cA
11 2esh-a2-m1-cA 114 67 0.2222 0.1930 0.3284 0.28 2esh-a2-m1-cA_2esh-a2-m2-cA
12 5zi8-a1-m1-cB 103 75 0.2323 0.2233 0.3067 0.39 5zi8-a1-m1-cB_5zi8-a1-m1-cA
13 5zi8-a1-m1-cA 104 75 0.2323 0.2212 0.3067 0.41 5zi8-a1-m1-cB_5zi8-a1-m1-cA
14 1z29-a1-m2-cA 281 89 0.2424 0.0854 0.2697 2.8 1z29-a1-m1-cA_1z29-a1-m2-cA
15 1z29-a1-m1-cA 281 89 0.2424 0.0854 0.2697 2.8 1z29-a1-m1-cA_1z29-a1-m2-cA
16 1vdr-a1-m1-cB 154 28 0.1010 0.0649 0.3571 4.7 1vdr-a1-m1-cB_1vdr-a1-m1-cA
17 1vdr-a1-m1-cA 157 28 0.1010 0.0637 0.3571 5.3 1vdr-a1-m1-cB_1vdr-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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