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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=96)
ERIPVEADFLYAYSTVPGYYSWRTTMTGSWFIQSLCEMMTKYGSELELLQIMTRVNHKVA
LDFESTSNMPGFDAKKQIPCIVSMLTKEMYFTPLEH

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7jl7-a1-m1-cC 96 96 1.0000 1.0000 1.0000 3.76e-70 7jl7-a1-m1-cD_7jl7-a1-m1-cC
2 7jl7-a1-m1-cD 94 93 0.9688 0.9894 1.0000 1.75e-67 7jl7-a1-m1-cD_7jl7-a1-m1-cC
3 6pdq-a1-m1-cB 87 92 0.6146 0.6782 0.6413 3.36e-41 6pdq-a1-m1-cE_6pdq-a1-m1-cB
4 6pdq-a1-m1-cE 85 92 0.6042 0.6824 0.6304 1.93e-40 6pdq-a1-m1-cE_6pdq-a1-m1-cB
5 4jqy-a1-m1-cB 205 91 0.6146 0.2878 0.6484 2.99e-38 4jqy-a1-m1-cA_4jqy-a1-m1-cB
6 3sip-a2-m1-cD 100 92 0.5208 0.5000 0.5435 3.95e-32 3sip-a2-m1-cD_3sip-a2-m1-cB
7 3sip-a2-m1-cB 103 92 0.5208 0.4854 0.5435 4.27e-32 3sip-a2-m1-cD_3sip-a2-m1-cB
8 1m72-a2-m2-cC 252 91 0.5208 0.1984 0.5495 7.45e-30 1m72-a2-m1-cC_1m72-a2-m2-cC
9 1m72-a2-m1-cC 252 91 0.5208 0.1984 0.5495 7.45e-30 1m72-a2-m1-cC_1m72-a2-m2-cC
10 4jqy-a1-m1-cA 194 90 0.5312 0.2629 0.5667 3.56e-27 4jqy-a1-m1-cA_4jqy-a1-m1-cB
11 4fxo-a1-m1-cD 220 91 0.4792 0.2091 0.5055 5.12e-27 4fxo-a1-m1-cD_4fxo-a1-m1-cB
12 4fxo-a1-m1-cB 227 91 0.4792 0.2026 0.5055 1.94e-26 4fxo-a1-m1-cD_4fxo-a1-m1-cB
13 3k7e-a1-m1-cC 212 91 0.4896 0.2217 0.5165 6.87e-26 3k7e-a1-m1-cB_3k7e-a1-m1-cC
14 3sir-a1-m1-cA 214 91 0.4688 0.2103 0.4945 7.83e-26 3sir-a1-m1-cB_3sir-a1-m1-cA
15 4fea-a1-m1-cA 170 92 0.4375 0.2471 0.4565 6.52e-23 4fea-a1-m1-cA_4fea-a1-m1-cB
16 4fea-a1-m1-cB 196 92 0.4479 0.2194 0.4674 6.63e-22 4fea-a1-m1-cA_4fea-a1-m1-cB
17 4m9r-a1-m1-cA 256 90 0.3750 0.1406 0.4000 3.42e-20 4m9r-a1-m1-cB_4m9r-a1-m1-cA
18 3sir-a1-m1-cB 172 91 0.4271 0.2384 0.4505 4.28e-19 3sir-a1-m1-cB_3sir-a1-m1-cA
19 3k7e-a1-m1-cB 200 87 0.3854 0.1850 0.4253 3.59e-17 3k7e-a1-m1-cB_3k7e-a1-m1-cC
20 3v6m-a3-m1-cF 203 91 0.3854 0.1823 0.4066 8.31e-17 3v6m-a3-m1-cF_3v6m-a3-m1-cG
21 3v6m-a3-m1-cG 204 91 0.3854 0.1814 0.4066 8.54e-17 3v6m-a3-m1-cF_3v6m-a3-m1-cG
22 1jxq-a2-m1-cC 242 91 0.2604 0.1033 0.2747 8.81e-10 1jxq-a2-m1-cD_1jxq-a2-m1-cC
23 1jxq-a2-m1-cD 226 89 0.2500 0.1062 0.2697 1.95e-09 1jxq-a2-m1-cD_1jxq-a2-m1-cC
24 4m9r-a1-m1-cB 223 90 0.3021 0.1300 0.3222 2.51e-09 4m9r-a1-m1-cB_4m9r-a1-m1-cA
25 1pyo-a1-m1-cB 98 94 0.2500 0.2449 0.2553 3.79e-08 1pyo-a1-m1-cB_1pyo-a1-m1-cD
26 1pyo-a1-m1-cD 99 94 0.2500 0.2424 0.2553 4.30e-08 1pyo-a1-m1-cB_1pyo-a1-m1-cD
27 3e4c-a1-m1-cB 257 90 0.2917 0.1089 0.3111 1.12e-04 3e4c-a1-m1-cB_3e4c-a1-m1-cA
28 3e4c-a1-m1-cA 271 90 0.2917 0.1033 0.3111 1.19e-04 3e4c-a1-m1-cB_3e4c-a1-m1-cA
29 6kmz-a2-m1-cd 88 90 0.3021 0.3295 0.3222 7.66e-04 6kmz-a2-m1-cc_6kmz-a2-m1-cd
30 6kmz-a2-m1-cc 88 90 0.3021 0.3295 0.3222 7.66e-04 6kmz-a2-m1-cc_6kmz-a2-m1-cd
31 6px9-a3-m1-cE 210 59 0.2188 0.1000 0.3559 0.001 6px9-a3-m1-cF_6px9-a3-m1-cE
32 6px9-a3-m1-cF 209 59 0.2188 0.1005 0.3559 0.001 6px9-a3-m1-cF_6px9-a3-m1-cE
33 6pbz-a1-m1-cD 454 48 0.1875 0.0396 0.3750 0.27 6pbz-a1-m1-cD_6pbz-a1-m1-cA, 6pbz-a1-m1-cD_6pbz-a1-m1-cC
34 1ysj-a1-m1-cB 348 30 0.1042 0.0287 0.3333 3.3 1ysj-a1-m1-cB_1ysj-a1-m1-cA
35 6p2k-a1-m6-cB 778 27 0.1146 0.0141 0.4074 3.3 6p2k-a1-m2-cA_6p2k-a1-m6-cB, 6p2k-a1-m4-cB_6p2k-a1-m6-cB
36 6p2k-a1-m4-cB 778 27 0.1146 0.0141 0.4074 3.3 6p2k-a1-m4-cB_6p2k-a1-m6-cB
37 1ysj-a1-m1-cA 351 30 0.1042 0.0285 0.3333 3.3 1ysj-a1-m1-cB_1ysj-a1-m1-cA
38 6p2k-a1-m2-cA 776 27 0.1146 0.0142 0.4074 3.3 6p2k-a1-m2-cA_6p2k-a1-m6-cB
39 1v6a-a1-m2-cB 332 87 0.2396 0.0693 0.2644 8.2 1v6a-a1-m1-cA_1v6a-a1-m2-cB, 1v6a-a1-m1-cB_1v6a-a1-m2-cB, 1v6a-a1-m2-cA_1v6a-a1-m2-cB
40 1v6a-a1-m2-cA 332 87 0.2396 0.0693 0.2644 8.2 1v6a-a1-m2-cA_1v6a-a1-m2-cB
41 1v6a-a1-m1-cB 332 87 0.2396 0.0693 0.2644 8.2 1v6a-a1-m1-cB_1v6a-a1-m2-cB
42 1v6a-a1-m1-cA 332 87 0.2396 0.0693 0.2644 8.2 1v6a-a1-m1-cA_1v6a-a1-m2-cB

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Reference:
Jacob Schwartz et al.

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