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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=80)
ERIQALRKEVDRVNREILRLLSERGRLVQEIGRLQTELGLPHYDPKREEEMLAYLTAENP
GPFPDETIRKLFKEIFKASL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2d8d-a1-m1-cA 80 80 1.0000 1.0000 1.0000 7.20e-53 2d8d-a1-m1-cA_2d8d-a1-m1-cB
2 2d8d-a1-m1-cB 83 80 1.0000 0.9639 1.0000 7.44e-53 2d8d-a1-m1-cA_2d8d-a1-m1-cB
3 5j6f-a1-m2-cA 352 80 0.5000 0.1136 0.5000 2.57e-21 5j6f-a1-m2-cB_5j6f-a1-m2-cA
4 5j6f-a1-m1-cA 352 80 0.5000 0.1136 0.5000 2.57e-21 5j6f-a1-m2-cB_5j6f-a1-m1-cA
5 5j6f-a1-m2-cB 340 80 0.5000 0.1176 0.5000 2.64e-21 5j6f-a1-m1-cB_5j6f-a1-m2-cB, 5j6f-a1-m2-cB_5j6f-a1-m1-cA, 5j6f-a1-m2-cB_5j6f-a1-m2-cA
6 5j6f-a1-m1-cB 340 80 0.5000 0.1176 0.5000 2.64e-21 5j6f-a1-m1-cB_5j6f-a1-m2-cB
7 3tfc-a1-m2-cA 343 75 0.4875 0.1137 0.5200 1.50e-18 3tfc-a1-m1-cA_3tfc-a1-m2-cA, 3tfc-a1-m2-cB_3tfc-a1-m2-cA
8 3tfc-a1-m1-cA 343 75 0.4875 0.1137 0.5200 1.50e-18 3tfc-a1-m1-cA_3tfc-a1-m2-cA, 3tfc-a1-m2-cB_3tfc-a1-m1-cA
9 3tfc-a1-m2-cB 330 79 0.4125 0.1000 0.4177 1.37e-11 3tfc-a1-m2-cB_3tfc-a1-m1-cA, 3tfc-a1-m2-cB_3tfc-a1-m2-cA
10 1ybz-a2-m2-cA 76 77 0.3625 0.3816 0.3766 2.76e-09 1ybz-a2-m1-cA_1ybz-a2-m2-cA
11 1ybz-a2-m1-cA 76 77 0.3625 0.3816 0.3766 2.76e-09 1ybz-a2-m1-cA_1ybz-a2-m2-cA
12 3rmi-a1-m2-cA 105 76 0.3125 0.2381 0.3289 8.96e-06 3rmi-a1-m1-cA_3rmi-a1-m2-cA
13 3rmi-a1-m1-cA 105 76 0.3125 0.2381 0.3289 8.96e-06 3rmi-a1-m1-cA_3rmi-a1-m2-cA
14 6al9-a1-m1-cB 91 77 0.3000 0.2637 0.3117 3.37e-05 6al9-a1-m1-cA_6al9-a1-m1-cB
15 6al9-a1-m1-cA 90 77 0.3000 0.2667 0.3117 3.50e-05 6al9-a1-m1-cA_6al9-a1-m1-cB
16 1ecm-a2-m1-cA 91 77 0.2875 0.2527 0.2987 0.071 1ecm-a2-m1-cA_1ecm-a2-m1-cB
17 1ecm-a2-m1-cB 95 77 0.2875 0.2421 0.2987 0.075 1ecm-a2-m1-cA_1ecm-a2-m1-cB
18 1ecm-a1-m2-cB 95 77 0.2875 0.2421 0.2987 0.075 1ecm-a1-m1-cB_1ecm-a1-m2-cB
19 1ecm-a1-m1-cB 95 77 0.2875 0.2421 0.2987 0.075 1ecm-a1-m1-cB_1ecm-a1-m2-cB
20 2w1a-a1-m2-cD 79 37 0.1750 0.1772 0.3784 0.096 2w1a-a1-m1-cD_2w1a-a1-m2-cD
21 2w1a-a1-m1-cD 79 37 0.1750 0.1772 0.3784 0.096 2w1a-a1-m1-cD_2w1a-a1-m2-cD
22 5hud-a1-m1-cH 83 37 0.1750 0.1687 0.3784 0.13 5hud-a1-m1-cG_5hud-a1-m1-cH
23 5hud-a1-m1-cG 83 37 0.1750 0.1687 0.3784 0.13 5hud-a1-m1-cG_5hud-a1-m1-cH
24 4b4d-a1-m2-cA 256 43 0.2000 0.0625 0.3721 1.1 4b4d-a1-m1-cA_4b4d-a1-m2-cA
25 4b4d-a1-m1-cA 256 43 0.2000 0.0625 0.3721 1.1 4b4d-a1-m1-cA_4b4d-a1-m2-cA
26 3h2z-a1-m2-cA 369 38 0.2125 0.0461 0.4474 1.4 3h2z-a1-m1-cA_3h2z-a1-m2-cA
27 3h2z-a1-m1-cA 369 38 0.2125 0.0461 0.4474 1.4 3h2z-a1-m1-cA_3h2z-a1-m2-cA
28 5whf-a1-m2-cG 88 78 0.2875 0.2614 0.2949 2.2 5whf-a1-m2-cD_5whf-a1-m2-cG, 5whf-a1-m2-cH_5whf-a1-m2-cG
29 5fiy-a1-m1-cA 75 49 0.2625 0.2800 0.4286 2.7 5fiy-a1-m1-cA_5fiy-a1-m1-cB
30 5whf-a1-m2-cH 84 75 0.2875 0.2738 0.3067 2.9 5whf-a1-m2-cH_5whf-a1-m2-cE, 5whf-a1-m2-cH_5whf-a1-m2-cG
31 7fby-a1-m8-cA 153 26 0.1750 0.0915 0.5385 3.0 7fby-a1-m2-cA_7fby-a1-m8-cA, 7fby-a1-m4-cA_7fby-a1-m8-cA, 7fby-a1-m6-cA_7fby-a1-m8-cA
32 7fby-a1-m6-cA 153 26 0.1750 0.0915 0.5385 3.0 7fby-a1-m6-cA_7fby-a1-m8-cA
33 7fby-a1-m4-cA 153 26 0.1750 0.0915 0.5385 3.0 7fby-a1-m4-cA_7fby-a1-m8-cA
34 7fby-a1-m2-cA 153 26 0.1750 0.0915 0.5385 3.0 7fby-a1-m2-cA_7fby-a1-m8-cA
35 1y1l-a1-m1-cD 124 77 0.2875 0.1855 0.2987 3.3 1y1l-a1-m1-cA_1y1l-a1-m1-cD, 1y1l-a1-m1-cC_1y1l-a1-m1-cD
36 1y1l-a1-m1-cC 124 77 0.2875 0.1855 0.2987 3.3 1y1l-a1-m1-cC_1y1l-a1-m1-cD
37 1y1l-a1-m1-cA 124 77 0.2875 0.1855 0.2987 3.3 1y1l-a1-m1-cA_1y1l-a1-m1-cD
38 5whf-a1-m2-cD 85 75 0.2875 0.2706 0.3067 3.4 5whf-a1-m2-cD_5whf-a1-m2-cG
39 5whf-a1-m2-cE 86 75 0.2875 0.2674 0.3067 3.9 5whf-a1-m2-cH_5whf-a1-m2-cE
40 5fiy-a1-m1-cB 75 49 0.2625 0.2800 0.4286 4.1 5fiy-a1-m1-cA_5fiy-a1-m1-cB
41 2f8j-a1-m1-cB 333 42 0.1625 0.0390 0.3095 4.8 2f8j-a1-m1-cB_2f8j-a1-m1-cA
42 2f8j-a1-m1-cA 335 42 0.1625 0.0388 0.3095 4.9 2f8j-a1-m1-cB_2f8j-a1-m1-cA
43 6kma-a2-m1-cC 839 36 0.1625 0.0155 0.3611 5.1 6kma-a2-m1-cD_6kma-a2-m1-cC
44 6kma-a2-m1-cD 836 36 0.1625 0.0156 0.3611 5.2 6kma-a2-m1-cD_6kma-a2-m1-cC
45 2dq3-a1-m1-cB 422 33 0.1875 0.0355 0.4545 6.0 2dq3-a1-m1-cA_2dq3-a1-m1-cB
46 2dq3-a1-m1-cA 422 33 0.1875 0.0355 0.4545 6.0 2dq3-a1-m1-cA_2dq3-a1-m1-cB
47 4cgk-a1-m2-cB 348 34 0.1375 0.0316 0.3235 6.7 4cgk-a1-m1-cB_4cgk-a1-m2-cB, 4cgk-a1-m2-cB_4cgk-a1-m1-cA, 4cgk-a1-m2-cB_4cgk-a1-m2-cA
48 4cgk-a1-m1-cB 348 34 0.1375 0.0316 0.3235 6.7 4cgk-a1-m1-cB_4cgk-a1-m2-cB
49 4cgk-a1-m2-cA 351 34 0.1375 0.0313 0.3235 6.7 4cgk-a1-m2-cB_4cgk-a1-m2-cA
50 4cgk-a1-m1-cA 351 34 0.1375 0.0313 0.3235 6.7 4cgk-a1-m2-cB_4cgk-a1-m1-cA
51 7xul-a1-m1-cB 690 31 0.1375 0.0159 0.3548 8.1 7xul-a1-m1-cA_7xul-a1-m1-cB
52 7xul-a1-m1-cA 690 31 0.1375 0.0159 0.3548 8.1 7xul-a1-m1-cA_7xul-a1-m1-cB
53 5xoy-a1-m2-cB 349 37 0.1375 0.0315 0.2973 10.0 5xoy-a1-m1-cA_5xoy-a1-m2-cB, 5xoy-a1-m2-cA_5xoy-a1-m2-cB

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Reference:
Jacob Schwartz et al.

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