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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=67)
ERKIFNRLKSVLAEKGKTNLWLTETLDKNKTTVSKWCTNDVQPSLETLFDIAEALNVDVR
ELIVSTK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3omt-a1-m1-cA 68 67 1.0000 0.9853 1.0000 5.38e-43 3omt-a1-m1-cB_3omt-a1-m1-cA
2 3omt-a1-m1-cB 67 67 1.0000 1.0000 1.0000 5.77e-43 3omt-a1-m1-cB_3omt-a1-m1-cA
3 3bs3-a1-m2-cA 58 59 0.4925 0.5690 0.5593 1.75e-15 3bs3-a1-m1-cA_3bs3-a1-m2-cA
4 3bs3-a1-m1-cA 58 59 0.4925 0.5690 0.5593 1.75e-15 3bs3-a1-m1-cA_3bs3-a1-m2-cA
5 6b9r-a2-m1-cB 442 60 0.3433 0.0520 0.3833 0.20 6b9r-a2-m1-cB_6b9r-a2-m1-cC
6 6b9r-a2-m1-cC 446 60 0.3433 0.0516 0.3833 0.20 6b9r-a2-m1-cB_6b9r-a2-m1-cC
7 6rmq-a2-m3-cB 121 61 0.2687 0.1488 0.2951 0.55 6rmq-a2-m1-cB_6rmq-a2-m3-cB
8 6rmq-a2-m1-cB 121 61 0.2687 0.1488 0.2951 0.55 6rmq-a2-m1-cB_6rmq-a2-m3-cB
9 6jq1-a1-m1-cB 130 61 0.2687 0.1385 0.2951 0.56 6jq1-a1-m1-cA_6jq1-a1-m1-cB
10 6jq1-a1-m1-cA 129 61 0.2687 0.1395 0.2951 0.61 6jq1-a1-m1-cA_6jq1-a1-m1-cB
11 3ks7-a2-m1-cD 386 52 0.2388 0.0415 0.3077 0.78 3ks7-a2-m1-cC_3ks7-a2-m1-cD
12 3ks7-a2-m1-cC 384 52 0.2388 0.0417 0.3077 0.81 3ks7-a2-m1-cC_3ks7-a2-m1-cD
13 3ivp-a2-m1-cC 109 25 0.1493 0.0917 0.4000 2.7 3ivp-a2-m1-cC_3ivp-a2-m1-cD
14 3ivp-a2-m1-cD 112 25 0.1493 0.0893 0.4000 2.9 3ivp-a2-m1-cC_3ivp-a2-m1-cD
15 3ivp-a1-m1-cA 113 25 0.1493 0.0885 0.4000 2.9 3ivp-a1-m1-cB_3ivp-a1-m1-cA
16 3ivp-a1-m1-cB 109 25 0.1493 0.0917 0.4000 2.9 3ivp-a1-m1-cB_3ivp-a1-m1-cA
17 5by7-a2-m1-cC 310 34 0.1642 0.0355 0.3235 3.6 5by7-a2-m1-cC_5by7-a2-m1-cB
18 5by7-a2-m1-cB 321 34 0.1642 0.0343 0.3235 3.6 5by7-a2-m1-cC_5by7-a2-m1-cB
19 5izv-a3-m3-cA 376 24 0.1045 0.0186 0.2917 5.8 5izv-a3-m1-cA_5izv-a3-m3-cA
20 5izv-a3-m1-cA 376 24 0.1045 0.0186 0.2917 5.8 5izv-a3-m1-cA_5izv-a3-m3-cA
21 4qhb-a3-m1-cD 374 51 0.1642 0.0294 0.2157 6.5 4qhb-a3-m1-cD_4qhb-a3-m1-cC
22 4qhb-a1-m1-cD 374 51 0.1642 0.0294 0.2157 6.5 4qhb-a1-m1-cD_4qhb-a1-m1-cB
23 4qhb-a3-m1-cC 380 51 0.1642 0.0289 0.2157 6.5 4qhb-a3-m1-cD_4qhb-a3-m1-cC
24 4qhb-a1-m1-cC 380 51 0.1642 0.0289 0.2157 6.5 4qhb-a1-m1-cB_4qhb-a1-m1-cC
25 4qhb-a1-m1-cB 380 51 0.1642 0.0289 0.2157 6.5 4qhb-a1-m1-cB_4qhb-a1-m1-cC, 4qhb-a1-m1-cD_4qhb-a1-m1-cB
26 6jpf-a1-m1-cB 610 35 0.1940 0.0213 0.3714 7.1 6jpf-a1-m1-cA_6jpf-a1-m1-cB
27 6jpf-a1-m1-cA 610 35 0.1940 0.0213 0.3714 7.1 6jpf-a1-m1-cA_6jpf-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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