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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=52)
ERLRVRDINEAFKELGRMVQLHLKSDKPQTKLLILHQAVAVILSLEQQVRER

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6od3-a4-m1-cI 59 52 1.0000 0.8814 1.0000 2.20e-31 6od3-a4-m1-cJ_6od3-a4-m1-cI
2 6od5-a1-m1-cA 62 52 1.0000 0.8387 1.0000 2.49e-31 6od5-a1-m1-cB_6od5-a1-m1-cA
3 6od3-a4-m1-cJ 52 52 1.0000 1.0000 1.0000 3.00e-31 6od3-a4-m1-cJ_6od3-a4-m1-cI
4 6od5-a1-m1-cB 60 51 0.9808 0.8500 1.0000 9.96e-31 6od5-a1-m1-cB_6od5-a1-m1-cA
5 3u5v-a1-m2-cA 62 52 0.8269 0.6935 0.8269 8.38e-24 3u5v-a1-m1-cA_3u5v-a1-m2-cA
6 3u5v-a1-m1-cA 62 52 0.8269 0.6935 0.8269 8.38e-24 3u5v-a1-m1-cA_3u5v-a1-m2-cA
7 4rk6-a1-m1-cA 261 28 0.2308 0.0460 0.4286 0.038 4rk6-a1-m1-cB_4rk6-a1-m1-cA
8 1q3i-a2-m3-cA 192 40 0.2308 0.0625 0.3000 0.27 1q3i-a2-m2-cA_1q3i-a2-m3-cA
9 1q3i-a2-m2-cA 192 40 0.2308 0.0625 0.3000 0.27 1q3i-a2-m2-cA_1q3i-a2-m3-cA
10 7z5k-a1-m1-cA 56 47 0.3077 0.2857 0.3404 0.36 7z5k-a1-m1-cA_7z5k-a1-m1-cB
11 7z5k-a1-m1-cB 56 47 0.3077 0.2857 0.3404 0.44 7z5k-a1-m1-cA_7z5k-a1-m1-cB
12 6fx5-a1-m1-cB 74 45 0.2692 0.1892 0.3111 1.8 6fx5-a1-m1-cA_6fx5-a1-m1-cB
13 1mdy-a2-m1-cD 62 51 0.3269 0.2742 0.3333 2.8 1mdy-a2-m1-cC_1mdy-a2-m1-cD
14 1mdy-a2-m1-cC 62 51 0.3269 0.2742 0.3333 2.8 1mdy-a2-m1-cC_1mdy-a2-m1-cD
15 6fx5-a1-m1-cA 72 44 0.2692 0.1944 0.3182 3.3 6fx5-a1-m1-cA_6fx5-a1-m1-cB
16 7d8t-a1-m1-cB 199 48 0.3077 0.0804 0.3333 7.4 7d8t-a1-m1-cA_7d8t-a1-m1-cB
17 7d8t-a1-m1-cA 199 48 0.3077 0.0804 0.3333 7.4 7d8t-a1-m1-cA_7d8t-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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