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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=95)
ERQRRLERIKQKQSQLQELILQQIAFKNLVQRNRHAEQPPPPNSVIHLPFIIVNTSKKTV
IDCSISNDKFEYLFNFDNTFEIHDDIEVLKRMGMA

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5tuv-a3-m1-cD 95 95 1.0000 1.0000 1.0000 1.59e-66 5tuv-a3-m1-cD_5tuv-a3-m1-cA
2 5tuu-a2-m2-cA 144 99 1.0000 0.6597 0.9596 1.76e-64 5tuu-a2-m1-cA_5tuu-a2-m2-cA
3 5tuu-a2-m1-cA 144 99 1.0000 0.6597 0.9596 1.76e-64 5tuu-a2-m1-cA_5tuu-a2-m2-cA
4 5tuv-a3-m1-cA 107 97 0.9895 0.8785 0.9691 1.68e-63 5tuv-a3-m1-cD_5tuv-a3-m1-cA
5 7x05-a1-m1-cB 801 27 0.1158 0.0137 0.4074 6.3 7x05-a1-m1-cA_7x05-a1-m1-cB
6 7x05-a1-m1-cA 801 27 0.1158 0.0137 0.4074 6.3 7x05-a1-m1-cA_7x05-a1-m1-cB
7 4z8t-a1-m2-cA 329 39 0.1474 0.0426 0.3590 6.8 4z8t-a1-m1-cA_4z8t-a1-m2-cA
8 4z8t-a1-m1-cA 329 39 0.1474 0.0426 0.3590 6.8 4z8t-a1-m1-cA_4z8t-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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