Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=62)
ESADMTCQEFIDLNPAMTPVAWWMLHEETVYGGDTVTLNETDLTQIPVIEYCNPQNLYTF
NQ

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2xuv-a2-m1-cD 62 62 1.0000 1.0000 1.0000 2.79e-42 2xuv-a2-m1-cC_2xuv-a2-m1-cD
2 2xuv-a2-m1-cC 62 62 1.0000 1.0000 1.0000 2.79e-42 2xuv-a2-m1-cC_2xuv-a2-m1-cD
3 2myj-a1-m1-cB 79 65 0.9194 0.7215 0.8769 1.29e-30 2myj-a1-m1-cA_2myj-a1-m1-cB
4 2myj-a1-m1-cA 79 65 0.9194 0.7215 0.8769 1.29e-30 2myj-a1-m1-cA_2myj-a1-m1-cB
5 4xvv-a1-m1-cA 72 49 0.3226 0.2778 0.4082 5.31e-06 4xvv-a1-m1-cB_4xvv-a1-m1-cA
6 4xvv-a1-m1-cB 68 49 0.3226 0.2941 0.4082 5.70e-06 4xvv-a1-m1-cB_4xvv-a1-m1-cA
7 5k3j-a1-m1-cB 659 20 0.1290 0.0121 0.4000 3.1 5k3j-a1-m1-cB_5k3j-a1-m1-cA
8 5k3j-a1-m1-cA 662 20 0.1290 0.0121 0.4000 3.1 5k3j-a1-m1-cB_5k3j-a1-m1-cA
9 5k3i-a1-m1-cB 657 20 0.1290 0.0122 0.4000 3.9 5k3i-a1-m1-cB_5k3i-a1-m1-cA
10 2ddh-a1-m2-cA 622 20 0.1452 0.0145 0.4500 4.0 2ddh-a1-m1-cA_2ddh-a1-m2-cA
11 2ddh-a1-m1-cA 622 20 0.1452 0.0145 0.4500 4.0 2ddh-a1-m1-cA_2ddh-a1-m2-cA
12 5k3i-a1-m1-cA 661 20 0.1290 0.0121 0.4000 4.0 5k3i-a1-m1-cB_5k3i-a1-m1-cA
13 7q84-a1-m1-cB 623 20 0.1452 0.0144 0.4500 4.2 7q84-a1-m1-cB_7q84-a1-m1-cA
14 7q84-a1-m1-cA 626 20 0.1452 0.0144 0.4500 4.2 7q84-a1-m1-cB_7q84-a1-m1-cA
15 7ldg-a1-m2-cA 215 26 0.1129 0.0326 0.2692 8.2 7ldg-a1-m1-cA_7ldg-a1-m2-cA, 7ldg-a1-m2-cC_7ldg-a1-m2-cA
16 7ldg-a1-m1-cA 215 26 0.1129 0.0326 0.2692 8.2 7ldg-a1-m1-cA_7ldg-a1-m2-cA
17 7ldg-a1-m2-cC 208 26 0.1129 0.0337 0.2692 9.6 7ldg-a1-m2-cC_7ldg-a1-m2-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600