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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=98)
ESFYGVTLTAESDSVTWDVARGQKLVIKQILLGAEAKENEFNVVEVNTPKDSVQIPIAVL
KAGETRAVNPDVEFYESKVTFKLIKGSGPVYIHGHNIK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1nlq-a1-m1-cE 98 98 1.0000 1.0000 1.0000 2.56e-68 1nlq-a1-m1-cC_1nlq-a1-m1-cE
2 1nlq-a1-m1-cC 96 98 0.9796 1.0000 0.9796 1.36e-64 1nlq-a1-m1-cC_1nlq-a1-m1-cE
3 1k5j-a1-m1-cD 90 76 0.2959 0.3222 0.3816 1.09e-06 1k5j-a1-m1-cC_1k5j-a1-m1-cD
4 3t30-a2-m1-cH 93 98 0.3367 0.3548 0.3367 1.12e-06 3t30-a2-m1-cI_3t30-a2-m1-cH
5 3t30-a2-m1-cI 92 98 0.3367 0.3587 0.3367 3.45e-06 3t30-a2-m1-cI_3t30-a2-m1-cH
6 1k5j-a1-m1-cC 89 76 0.2857 0.3146 0.3684 6.66e-06 1k5j-a1-m1-cC_1k5j-a1-m1-cD
7 1xe0-a2-m1-cJ 104 103 0.3163 0.2981 0.3010 9.09e-06 1xe0-a2-m1-cJ_1xe0-a2-m1-cI
8 1xe0-a2-m1-cI 105 104 0.3163 0.2952 0.2981 4.11e-05 1xe0-a2-m1-cJ_1xe0-a2-m1-cI
9 4lns-a1-m2-cA 304 70 0.1939 0.0625 0.2714 1.8 4lns-a1-m1-cA_4lns-a1-m2-cA
10 4lns-a1-m1-cA 304 70 0.1939 0.0625 0.2714 1.8 4lns-a1-m1-cA_4lns-a1-m2-cA
11 8as5-a1-m1-cE 97 102 0.2857 0.2887 0.2745 2.4 8as5-a1-m1-cA_8as5-a1-m1-cE
12 1g60-a1-m1-cB 228 64 0.1735 0.0746 0.2656 3.1 1g60-a1-m1-cB_1g60-a1-m1-cA
13 1vkh-a2-m1-cA 253 32 0.1122 0.0435 0.3438 3.3 1vkh-a2-m2-cB_1vkh-a2-m1-cA
14 1vkh-a1-m1-cA 253 32 0.1122 0.0435 0.3438 3.3 1vkh-a1-m1-cB_1vkh-a1-m1-cA
15 3f81-a2-m3-cB 179 83 0.2551 0.1397 0.3012 4.4 3f81-a2-m1-cB_3f81-a2-m3-cB
16 3f81-a2-m1-cB 179 83 0.2551 0.1397 0.3012 4.4 3f81-a2-m1-cB_3f81-a2-m3-cB
17 2vx2-a3-m1-cG 253 57 0.1735 0.0672 0.2982 4.6 2vx2-a3-m1-cG_2vx2-a3-m1-cI
18 2vx2-a3-m1-cI 254 57 0.1837 0.0709 0.3158 4.7 2vx2-a3-m1-cG_2vx2-a3-m1-cI
19 3tsb-a1-m4-cA 490 48 0.1327 0.0265 0.2708 5.0 3tsb-a1-m2-cA_3tsb-a1-m4-cA
20 3tsb-a1-m2-cA 490 48 0.1327 0.0265 0.2708 5.0 3tsb-a1-m2-cA_3tsb-a1-m4-cA
21 3tsb-a2-m4-cB 434 48 0.1327 0.0300 0.2708 5.1 3tsb-a2-m2-cB_3tsb-a2-m4-cB
22 3tsb-a2-m2-cB 434 48 0.1327 0.0300 0.2708 5.1 3tsb-a2-m2-cB_3tsb-a2-m4-cB
23 3ihb-a2-m3-cB 448 79 0.2347 0.0513 0.2911 8.9 3ihb-a2-m1-cB_3ihb-a2-m3-cB
24 3ihb-a2-m1-cB 448 79 0.2347 0.0513 0.2911 8.9 3ihb-a2-m1-cB_3ihb-a2-m3-cB

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Reference:
Jacob Schwartz et al.

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