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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=42)
ESLNPESLAKLQTTLSNYSIGVSLAGTLARKTVSAVETLLKS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 8axk-a1-m1-cR 85 42 1.0000 0.4941 1.0000 3.80e-23 8axk-a1-m1-cM_8axk-a1-m1-cR
2 8axk-a1-m1-cM 42 42 1.0000 1.0000 1.0000 9.23e-23 8axk-a1-m1-cM_8axk-a1-m1-cR
3 6q16-a1-m1-cAM 39 39 0.4762 0.5128 0.5128 5.45e-07 6q16-a1-m1-cAM_6q16-a1-m1-cAR
4 6q16-a1-m1-cAR 88 39 0.4762 0.2273 0.5128 1.45e-06 6q16-a1-m1-cAM_6q16-a1-m1-cAR
5 7ahi-a1-m1-c1K 90 39 0.4762 0.2222 0.5128 1.47e-06 7ahi-a1-m1-c1K_7ahi-a1-m1-c1L
6 7ahi-a1-m1-c1L 94 39 0.4762 0.2128 0.5128 1.77e-06 7ahi-a1-m1-c1K_7ahi-a1-m1-c1L
7 4yv4-a2-m1-cB 51 18 0.1905 0.1569 0.4444 6.9 4yv4-a2-m1-cB_4yv4-a2-m1-cD
8 4yv4-a3-m1-cE 53 18 0.1905 0.1509 0.4444 7.8 4yv4-a3-m1-cE_4yv4-a3-m1-cH
9 1vl2-a1-m1-cA 398 28 0.2381 0.0251 0.3571 8.0 1vl2-a1-m1-cD_1vl2-a1-m1-cA
10 1vl2-a1-m1-cC 393 28 0.2381 0.0254 0.3571 8.2 1vl2-a1-m1-cD_1vl2-a1-m1-cC

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Reference:
Jacob Schwartz et al.

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