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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=81)
ESNLTTAASVIAAALAVGIGSIGPGLGQGQAAGQAVEGIARQPEAEGKIRGTLLLSLAFM
EALTIYGLVVALVLLFANPFV

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2xqu-a1-m3-cE 81 81 1.0000 1.0000 1.0000 3.43e-50 2xqu-a1-m3-cD_2xqu-a1-m3-cE
2 2xqu-a1-m3-cD 81 81 1.0000 1.0000 1.0000 3.43e-50 2xqu-a1-m3-cD_2xqu-a1-m3-cE
3 2wgm-a4-m1-cV 89 84 0.5679 0.5169 0.5476 6.78e-23 2wgm-a4-m1-cU_2wgm-a4-m1-cV
4 2wgm-a4-m1-cU 89 84 0.5679 0.5169 0.5476 6.78e-23 2wgm-a4-m1-cU_2wgm-a4-m1-cV
5 3zk2-a2-m1-cT 89 84 0.5185 0.4719 0.5000 3.72e-21 3zk2-a2-m1-cS_3zk2-a2-m1-cT
6 3zk2-a2-m1-cS 89 84 0.5185 0.4719 0.5000 3.72e-21 3zk2-a2-m1-cS_3zk2-a2-m1-cT
7 4bem-a1-m1-cI 81 78 0.5062 0.5062 0.5256 6.16e-20 4bem-a1-m1-cH_4bem-a1-m1-cI
8 4bem-a1-m1-cH 81 78 0.5062 0.5062 0.5256 6.16e-20 4bem-a1-m1-cH_4bem-a1-m1-cI
9 5fl7-a1-m1-cQ 76 75 0.2963 0.3158 0.3200 4.38e-04 5fl7-a1-m1-cP_5fl7-a1-m1-cQ
10 5fl7-a1-m1-cP 75 75 0.2963 0.3200 0.3200 4.44e-04 5fl7-a1-m1-cP_5fl7-a1-m1-cQ
11 2x2v-a1-m1-cJ 68 42 0.1728 0.2059 0.3333 0.002 2x2v-a1-m1-cI_2x2v-a1-m1-cJ
12 2x2v-a1-m1-cI 68 42 0.1728 0.2059 0.3333 0.002 2x2v-a1-m1-cI_2x2v-a1-m1-cJ
13 4f4s-a2-m3-cO 74 74 0.2716 0.2973 0.2973 0.005 4f4s-a2-m3-cN_4f4s-a2-m3-cO
14 4f4s-a2-m3-cN 74 74 0.2716 0.2973 0.2973 0.005 4f4s-a2-m3-cN_4f4s-a2-m3-cO
15 4xtr-a1-m1-cB 311 50 0.1975 0.0514 0.3200 3.8 4xtr-a1-m1-cA_4xtr-a1-m1-cB
16 5jc8-a1-m1-cD 262 18 0.1358 0.0420 0.6111 6.2 5jc8-a1-m1-cB_5jc8-a1-m1-cD, 5jc8-a1-m1-cC_5jc8-a1-m1-cD, 5jc8-a1-m1-cD_5jc8-a1-m1-cA
17 5jc8-a1-m1-cB 253 18 0.1358 0.0435 0.6111 6.4 5jc8-a1-m1-cB_5jc8-a1-m1-cD
18 5jc8-a1-m1-cC 252 18 0.1358 0.0437 0.6111 6.4 5jc8-a1-m1-cC_5jc8-a1-m1-cD
19 5jc8-a1-m1-cA 263 18 0.1358 0.0418 0.6111 6.5 5jc8-a1-m1-cD_5jc8-a1-m1-cA
20 2bl2-a1-m1-cI 156 67 0.1975 0.1026 0.2388 8.5 2bl2-a1-m1-cH_2bl2-a1-m1-cI
21 2bl2-a1-m1-cH 156 67 0.1975 0.1026 0.2388 8.5 2bl2-a1-m1-cH_2bl2-a1-m1-cI
22 3h84-a2-m2-cB 323 47 0.1852 0.0464 0.3191 9.1 3h84-a2-m1-cB_3h84-a2-m2-cB
23 3h84-a2-m1-cB 323 47 0.1852 0.0464 0.3191 9.1 3h84-a2-m1-cB_3h84-a2-m2-cB

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Reference:
Jacob Schwartz et al.

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