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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=67)
ETDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMR
RHTGEKP

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7t91-a1-m1-cA 67 67 1.0000 1.0000 1.0000 1.15e-46 7t91-a1-m1-cB_7t91-a1-m1-cA
2 7t91-a1-m1-cB 62 62 0.9254 1.0000 1.0000 8.36e-43 7t91-a1-m1-cB_7t91-a1-m1-cA
3 6a57-a1-m2-cA 131 64 0.3134 0.1603 0.3281 1.54e-04 6a57-a1-m1-cA_6a57-a1-m2-cA
4 6a57-a1-m1-cA 131 64 0.3134 0.1603 0.3281 1.54e-04 6a57-a1-m1-cA_6a57-a1-m2-cA
5 5v3g-a1-m1-cD 170 59 0.2985 0.1176 0.3390 0.021 5v3g-a1-m1-cG_5v3g-a1-m1-cD
6 5v3g-a1-m1-cD 170 59 0.3134 0.1235 0.3559 0.028 5v3g-a1-m1-cG_5v3g-a1-m1-cD
7 5v3g-a1-m1-cD 170 59 0.3134 0.1235 0.3559 0.048 5v3g-a1-m1-cG_5v3g-a1-m1-cD
8 8h9h-a1-m1-cG 81 19 0.1940 0.1605 0.6842 0.14 8h9h-a1-m1-cF_8h9h-a1-m1-cG
9 1f2i-a2-m1-cJ 66 60 0.2687 0.2727 0.3000 0.52 1f2i-a2-m1-cI_1f2i-a2-m1-cJ
10 1f2i-a2-m1-cI 66 60 0.2687 0.2727 0.3000 0.52 1f2i-a2-m1-cI_1f2i-a2-m1-cJ
11 1llm-a1-m1-cC 87 22 0.1642 0.1264 0.5000 2.2 1llm-a1-m1-cD_1llm-a1-m1-cC
12 1llm-a1-m1-cD 85 22 0.1642 0.1294 0.5000 2.5 1llm-a1-m1-cD_1llm-a1-m1-cC
13 1pfk-a1-m2-cB 320 30 0.1642 0.0344 0.3667 2.6 1pfk-a1-m1-cA_1pfk-a1-m2-cB
14 1pfk-a1-m1-cA 320 30 0.1642 0.0344 0.3667 2.6 1pfk-a1-m1-cA_1pfk-a1-m2-cB
15 3i4e-a1-m1-cD 412 34 0.1791 0.0291 0.3529 6.6 3i4e-a1-m1-cA_3i4e-a1-m1-cD, 3i4e-a1-m1-cB_3i4e-a1-m1-cD, 3i4e-a1-m1-cC_3i4e-a1-m1-cD
16 3i4e-a1-m1-cC 412 34 0.1791 0.0291 0.3529 6.6 3i4e-a1-m1-cC_3i4e-a1-m1-cD
17 3i4e-a1-m1-cB 412 34 0.1791 0.0291 0.3529 6.6 3i4e-a1-m1-cB_3i4e-a1-m1-cD
18 3i4e-a1-m1-cA 412 34 0.1791 0.0291 0.3529 6.6 3i4e-a1-m1-cA_3i4e-a1-m1-cD

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Reference:
Jacob Schwartz et al.

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