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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=94)
ETINLKQHLAAIKEYWQPEIINRHGFQFHLVKLLGDYGWHTHYSDKVLFAVEGDAVDFAD
GGSTIREGEAVVPKSVSHRPRSENGCSLVLIELS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2i45-a3-m1-cE 94 94 1.0000 1.0000 1.0000 2.75e-67 2i45-a3-m1-cE_2i45-a3-m1-cF
2 2i45-a3-m1-cF 96 95 1.0000 0.9792 0.9895 2.73e-65 2i45-a3-m1-cE_2i45-a3-m1-cF
3 3d82-a2-m2-cA 96 91 0.3298 0.3229 0.3407 2.20e-16 3d82-a2-m1-cA_3d82-a2-m2-cA
4 3d82-a2-m1-cA 96 91 0.3298 0.3229 0.3407 2.20e-16 3d82-a2-m1-cA_3d82-a2-m2-cA
5 3kkl-a1-m1-cB 216 30 0.1170 0.0509 0.3667 0.19 3kkl-a1-m1-cA_3kkl-a1-m1-cB
6 3kkl-a1-m1-cA 215 30 0.1170 0.0512 0.3667 0.20 3kkl-a1-m1-cA_3kkl-a1-m1-cB
7 3mii-a1-m1-cB 234 54 0.1596 0.0641 0.2778 0.63 3mii-a1-m1-cA_3mii-a1-m1-cB
8 3mii-a1-m1-cA 233 54 0.1596 0.0644 0.2778 0.71 3mii-a1-m1-cA_3mii-a1-m1-cB
9 5ui9-a1-m1-cB 342 50 0.1596 0.0439 0.3000 2.5 5ui9-a1-m1-cA_5ui9-a1-m1-cB
10 5ui9-a1-m1-cA 342 50 0.1596 0.0439 0.3000 2.5 5ui9-a1-m1-cA_5ui9-a1-m1-cB
11 2q0h-a1-m1-cB 242 36 0.1809 0.0702 0.4722 2.8 2q0h-a1-m1-cA_2q0h-a1-m1-cB
12 2olk-a1-m1-cD 242 36 0.1809 0.0702 0.4722 2.8 2olk-a1-m1-cA_2olk-a1-m1-cD, 2olk-a1-m1-cC_2olk-a1-m1-cD
13 2olk-a1-m1-cC 242 36 0.1809 0.0702 0.4722 2.8 2olk-a1-m1-cB_2olk-a1-m1-cC, 2olk-a1-m1-cC_2olk-a1-m1-cD
14 2olk-a1-m1-cB 242 36 0.1809 0.0702 0.4722 2.8 2olk-a1-m1-cA_2olk-a1-m1-cB, 2olk-a1-m1-cB_2olk-a1-m1-cC
15 2olk-a1-m1-cA 242 36 0.1809 0.0702 0.4722 2.8 2olk-a1-m1-cA_2olk-a1-m1-cB, 2olk-a1-m1-cA_2olk-a1-m1-cD
16 2q0h-a1-m1-cA 241 36 0.1809 0.0705 0.4722 3.0 2q0h-a1-m1-cA_2q0h-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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