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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=80)
ETKPRIAIRYCTQCNWLLRAGWAQEILQTFASDIGEVSLIPSTGGLFEITVDGTIIWERK
RDGGFPGPKELKQRIRDLID

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2fa8-a1-m1-cC 80 80 1.0000 1.0000 1.0000 1.00e-54 2fa8-a1-m1-cC_2fa8-a1-m1-cB, 2fa8-a1-m1-cC_2fa8-a1-m1-cD
2 2fa8-a1-m1-cD 80 79 0.9875 0.9875 1.0000 6.15e-54 2fa8-a1-m1-cC_2fa8-a1-m1-cD
3 2fa8-a1-m1-cB 86 79 0.9875 0.9186 1.0000 7.94e-54 2fa8-a1-m1-cC_2fa8-a1-m1-cB
4 2ojl-a1-m2-cA 78 76 0.6000 0.6154 0.6316 7.92e-34 2ojl-a1-m2-cB_2ojl-a1-m2-cA
5 2ojl-a1-m1-cA 78 76 0.6000 0.6154 0.6316 7.92e-34 2ojl-a1-m2-cB_2ojl-a1-m1-cA
6 2ojl-a1-m2-cB 76 76 0.6000 0.6316 0.6316 8.36e-34 2ojl-a1-m2-cB_2ojl-a1-m1-cA, 2ojl-a1-m2-cB_2ojl-a1-m2-cA
7 2oka-a1-m1-cD 84 80 0.6625 0.6310 0.6625 1.83e-33 2oka-a1-m1-cA_2oka-a1-m1-cD, 2oka-a1-m1-cC_2oka-a1-m1-cD
8 2oka-a1-m1-cC 84 80 0.6625 0.6310 0.6625 1.83e-33 2oka-a1-m1-cC_2oka-a1-m1-cD
9 2oka-a1-m1-cA 84 80 0.6625 0.6310 0.6625 1.83e-33 2oka-a1-m1-cA_2oka-a1-m1-cD
10 2obk-a2-m1-cE 80 79 0.6625 0.6625 0.6709 1.99e-33 2obk-a2-m1-cE_2obk-a2-m1-cH
11 2obk-a2-m1-cH 83 79 0.6625 0.6386 0.6709 2.42e-33 2obk-a2-m1-cE_2obk-a2-m1-cH
12 2obk-a1-m1-cA 84 79 0.6625 0.6310 0.6709 2.55e-33 2obk-a1-m1-cA_2obk-a1-m1-cB
13 2obk-a1-m1-cB 85 79 0.6625 0.6235 0.6709 2.56e-33 2obk-a1-m1-cA_2obk-a1-m1-cB
14 2p0g-a1-m1-cC 79 79 0.5750 0.5823 0.5823 2.95e-28 2p0g-a1-m1-cC_2p0g-a1-m1-cD
15 2p0g-a1-m1-cD 79 78 0.5750 0.5823 0.5897 5.64e-28 2p0g-a1-m1-cA_2p0g-a1-m1-cD, 2p0g-a1-m1-cC_2p0g-a1-m1-cD
16 2p0g-a1-m1-cA 77 77 0.5625 0.5844 0.5844 3.33e-27 2p0g-a1-m1-cA_2p0g-a1-m1-cD
17 3dex-a4-m1-cH 83 76 0.4625 0.4458 0.4868 2.77e-22 3dex-a4-m1-cG_3dex-a4-m1-cH
18 3dex-a4-m1-cG 77 76 0.4625 0.4805 0.4868 3.62e-22 3dex-a4-m1-cG_3dex-a4-m1-cH
19 4atq-a3-m1-cI 440 12 0.1125 0.0205 0.7500 1.7 4atq-a3-m1-cL_4atq-a3-m1-cI
20 6i1r-a1-m1-cA 309 39 0.1500 0.0388 0.3077 2.3 6i1r-a1-m1-cA_6i1r-a1-m1-cB
21 3zsc-a1-m3-cA 329 43 0.1875 0.0456 0.3488 5.6 3zsc-a1-m2-cA_3zsc-a1-m3-cA
22 3zsc-a1-m2-cA 329 43 0.1875 0.0456 0.3488 5.6 3zsc-a1-m2-cA_3zsc-a1-m3-cA
23 8i0n-a1-m1-cB 362 54 0.2375 0.0525 0.3519 6.6 8i0n-a1-m1-cA_8i0n-a1-m1-cB
24 8i0n-a1-m1-cA 362 54 0.2375 0.0525 0.3519 6.6 8i0n-a1-m1-cA_8i0n-a1-m1-cB
25 8glv-a1-m1-cFa 4484 30 0.1125 0.0020 0.3000 9.5 8glv-a1-m1-cAX_8glv-a1-m1-cFa
26 8glv-a1-m1-cAX 4484 30 0.1125 0.0020 0.3000 9.5 8glv-a1-m1-cAX_8glv-a1-m1-cFa

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Reference:
Jacob Schwartz et al.

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