Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=40)
ETLKQRLTNLEKKITNVTTKFEQIEKAAKRNDEVLFRLEN

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3vop-a1-m1-cB 40 40 1.0000 1.0000 1.0000 1.55e-21 3vop-a1-m1-cA_3vop-a1-m1-cB, 3vop-a1-m1-cB_3vop-a1-m1-cC
2 3vop-a1-m1-cA 40 40 1.0000 1.0000 1.0000 1.55e-21 3vop-a1-m1-cA_3vop-a1-m1-cB, 3vop-a1-m1-cA_3vop-a1-m1-cC
3 3vop-a1-m1-cC 43 40 1.0000 0.9302 1.0000 1.73e-21 3vop-a1-m1-cA_3vop-a1-m1-cC, 3vop-a1-m1-cB_3vop-a1-m1-cC
4 6dnf-a1-m1-cD 225 28 0.2750 0.0489 0.3929 2.4 6dnf-a1-m1-cA_6dnf-a1-m1-cD, 6dnf-a1-m1-cC_6dnf-a1-m1-cD
5 6dnf-a1-m1-cC 225 28 0.2750 0.0489 0.3929 2.4 6dnf-a1-m1-cC_6dnf-a1-m1-cD
6 6dnf-a1-m1-cA 225 28 0.2750 0.0489 0.3929 2.4 6dnf-a1-m1-cA_6dnf-a1-m1-cD
7 6q5q-a1-m4-cA 32 28 0.2250 0.2812 0.3214 9.0 6q5q-a1-m1-cA_6q5q-a1-m4-cA, 6q5q-a1-m2-cA_6q5q-a1-m4-cA
8 6q5q-a1-m2-cA 32 28 0.2250 0.2812 0.3214 9.0 6q5q-a1-m2-cA_6q5q-a1-m4-cA
9 6q5q-a1-m1-cA 32 28 0.2250 0.2812 0.3214 9.0 6q5q-a1-m1-cA_6q5q-a1-m4-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600