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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=61)
ETLQRCLEENQELRDAIRQSNQILRERCEELLHFQASQREEKEFLMCKFQEARKLVERLG
L

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3brv-a1-m1-cB 61 61 1.0000 1.0000 1.0000 1.28e-36 3brv-a1-m1-cB_3brv-a1-m1-cD
2 3brv-a1-m1-cD 62 61 1.0000 0.9839 1.0000 1.55e-36 3brv-a1-m1-cB_3brv-a1-m1-cD
3 6mi3-a1-m1-cA 122 59 0.9016 0.4508 0.9322 3.85e-32 6mi3-a1-m1-cA_6mi3-a1-m1-cB
4 6mi3-a1-m1-cB 124 59 0.9016 0.4435 0.9322 4.40e-32 6mi3-a1-m1-cA_6mi3-a1-m1-cB
5 5eof-a1-m1-cB 74 51 0.2787 0.2297 0.3333 3.37e-04 5eof-a1-m1-cA_5eof-a1-m1-cB
6 5eof-a1-m1-cA 74 51 0.2787 0.2297 0.3333 3.37e-04 5eof-a1-m1-cA_5eof-a1-m1-cB
7 1aa1-a1-m2-cL 437 24 0.1639 0.0229 0.4167 1.4 1aa1-a1-m2-cB_1aa1-a1-m2-cL
8 1aa1-a1-m2-cB 437 24 0.1639 0.0229 0.4167 1.4 1aa1-a1-m2-cB_1aa1-a1-m2-cL
9 1rco-a1-m1-cV 467 24 0.1639 0.0214 0.4167 1.4 1rco-a1-m1-cL_1rco-a1-m1-cV, 1rco-a1-m1-cR_1rco-a1-m1-cV
10 1rco-a1-m1-cR 467 24 0.1639 0.0214 0.4167 1.4 1rco-a1-m1-cR_1rco-a1-m1-cV
11 1rco-a1-m1-cL 467 24 0.1639 0.0214 0.4167 1.4 1rco-a1-m1-cL_1rco-a1-m1-cV
12 7ums-a1-m1-c3 486 20 0.1639 0.0206 0.5000 3.5 7ums-a1-m1-c3_7ums-a1-m1-c1, 7ums-a1-m1-c3_7ums-a1-m1-c2
13 7ums-a1-m1-c2 499 20 0.1639 0.0200 0.5000 3.5 7ums-a1-m1-c1_7ums-a1-m1-c2, 7ums-a1-m1-c3_7ums-a1-m1-c2
14 7ums-a1-m1-c1 499 20 0.1639 0.0200 0.5000 3.5 7ums-a1-m1-c1_7ums-a1-m1-c2, 7ums-a1-m1-c3_7ums-a1-m1-c1
15 8co6-a1-m5-cA 726 20 0.1639 0.0138 0.5000 4.4 8co6-a1-m5-cA_8co6-a1-m5-cB
16 8co6-a1-m5-cB 744 20 0.1639 0.0134 0.5000 4.4 8co6-a1-m5-cA_8co6-a1-m5-cB
17 1rbl-a1-m1-cH 467 24 0.1639 0.0214 0.4167 4.6 1rbl-a1-m1-cE_1rbl-a1-m1-cH, 1rbl-a1-m1-cF_1rbl-a1-m1-cH, 1rbl-a1-m1-cG_1rbl-a1-m1-cH
18 1rbl-a1-m1-cG 467 24 0.1639 0.0214 0.4167 4.6 1rbl-a1-m1-cG_1rbl-a1-m1-cH
19 1rbl-a1-m1-cF 467 24 0.1639 0.0214 0.4167 4.6 1rbl-a1-m1-cF_1rbl-a1-m1-cH
20 1rbl-a1-m1-cE 467 24 0.1639 0.0214 0.4167 4.6 1rbl-a1-m1-cE_1rbl-a1-m1-cH
21 2gjl-a2-m2-cA 324 20 0.1475 0.0278 0.4500 5.6 2gjl-a2-m1-cA_2gjl-a2-m2-cA
22 2gjl-a2-m1-cA 324 20 0.1475 0.0278 0.4500 5.6 2gjl-a2-m1-cA_2gjl-a2-m2-cA
23 2x0j-a1-m2-cA 294 17 0.1639 0.0340 0.5882 6.5 2x0j-a1-m2-cA_2x0j-a1-m1-cA
24 2x0j-a1-m1-cA 294 17 0.1639 0.0340 0.5882 6.5 2x0j-a1-m2-cA_2x0j-a1-m1-cA
25 3siw-a2-m2-cA 290 48 0.2623 0.0552 0.3333 7.6 3siw-a2-m1-cA_3siw-a2-m2-cA
26 3siw-a2-m1-cA 290 48 0.2623 0.0552 0.3333 7.6 3siw-a2-m1-cA_3siw-a2-m2-cA
27 7xsd-a1-m1-cH 394 24 0.1311 0.0203 0.3333 9.9 7xsd-a1-m1-cE_7xsd-a1-m1-cH, 7xsd-a1-m1-cG_7xsd-a1-m1-cH
28 7xsd-a1-m1-cG 394 24 0.1311 0.0203 0.3333 9.9 7xsd-a1-m1-cG_7xsd-a1-m1-cH
29 7xsd-a1-m1-cE 394 24 0.1311 0.0203 0.3333 9.9 7xsd-a1-m1-cE_7xsd-a1-m1-cH

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Reference:
Jacob Schwartz et al.

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