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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=72)
ETLTASRLASAPPQKQKQLGERLFPLIQAHPTLAGKITGLLEIDNSELLYLESPESLRSK
VDEAVAVLQAHQ

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4ive-a3-m1-cD 72 72 1.0000 1.0000 1.0000 1.02e-46 4ive-a3-m1-cC_4ive-a3-m1-cD
2 4ive-a3-m1-cC 72 72 1.0000 1.0000 1.0000 1.02e-46 4ive-a3-m1-cC_4ive-a3-m1-cD
3 4ive-a1-m1-cD 72 72 1.0000 1.0000 1.0000 1.02e-46 4ive-a1-m1-cA_4ive-a1-m1-cD, 4ive-a1-m1-cD_4ive-a1-m1-cB
4 4ive-a1-m1-cB 73 72 1.0000 0.9863 1.0000 1.09e-46 4ive-a1-m1-cD_4ive-a1-m1-cB
5 4ive-a1-m1-cA 72 71 0.9861 0.9861 1.0000 5.51e-46 4ive-a1-m1-cA_4ive-a1-m1-cD
6 3pkn-a2-m2-cA 79 74 0.9306 0.8481 0.9054 1.34e-35 3pkn-a2-m1-cA_3pkn-a2-m2-cA
7 3pkn-a2-m1-cA 79 74 0.9306 0.8481 0.9054 1.34e-35 3pkn-a2-m1-cA_3pkn-a2-m2-cA
8 3um7-a1-m1-cB 244 28 0.1528 0.0451 0.3929 2.9 3um7-a1-m1-cB_3um7-a1-m1-cA
9 4wfh-a1-m1-cA 253 28 0.1528 0.0435 0.3929 2.9 4wfh-a1-m1-cB_4wfh-a1-m1-cA
10 3um7-a1-m1-cA 259 28 0.1528 0.0425 0.3929 3.0 3um7-a1-m1-cB_3um7-a1-m1-cA
11 4wfh-a1-m1-cB 243 28 0.1528 0.0453 0.3929 3.3 4wfh-a1-m1-cB_4wfh-a1-m1-cA
12 3cyj-a1-m2-cD 359 20 0.1389 0.0279 0.5000 8.2 3cyj-a1-m1-cB_3cyj-a1-m2-cD, 3cyj-a1-m2-cA_3cyj-a1-m2-cD, 3cyj-a1-m2-cC_3cyj-a1-m2-cD
13 3cyj-a1-m2-cC 359 20 0.1389 0.0279 0.5000 8.2 3cyj-a1-m2-cC_3cyj-a1-m2-cD
14 3cyj-a1-m2-cA 359 20 0.1389 0.0279 0.5000 8.2 3cyj-a1-m2-cA_3cyj-a1-m2-cD
15 3cyj-a1-m1-cB 359 20 0.1389 0.0279 0.5000 8.2 3cyj-a1-m1-cB_3cyj-a1-m2-cD
16 1wdz-a1-m1-cB 222 40 0.1528 0.0495 0.2750 9.8 1wdz-a1-m1-cB_1wdz-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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